RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 IL5RAQ01344 420 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 LRRC74AQ0VAA2 488 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 IKZF1Q13422 519 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 NPTX1Q15818 432 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 PLA1AQ53H76 456 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 CCDC92Q53HC0 331 aaPredicted RBP6.64□□□□□ -1.35
CLIP1-206ENST00000535290 KHDC1LQ5JSQ8 128 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 WDR38Q5JTN6 314 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 TEX36Q5VZQ5 186 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 COLCA1Q6ZS62 124 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 CENPVQ7Z7K6 275 aaPredicted RBP6.64□□□□□ -1.35
CLIP1-206ENST00000535290 DYNAPQ8N1N2 210 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 ZNF781Q8N8C0 355 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 OR1F12Q8NHA8 337 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 TCP10LQ8TDR4 215 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 APOBEC3DQ96AK3 386 aaPredicted RBP6.64□□□□□ -1.35
CLIP1-206ENST00000535290 SEH1LQ96EE3 360 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 EAF1Q96JC9 268 aaPredicted RBP6.64□□□□□ -1.35
CLIP1-206ENST00000535290 RHOVQ96L33 236 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 ZNF426Q9BUY5 554 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 ALG12Q9BV10 488 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 TXNIPQ9H3M7 391 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 RAD21L1Q9H4I0 556 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 AIG1Q9NVV5 245 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 STX18Q9P2W9 335 aaKnown RBP6.64□□□□□ -1.35
CLIP1-206ENST00000535290 ZMAT5Q9UDW3 170 aaKnown RBP6.64□□□□□ -1.35
CLIP1-206ENST00000535290 hCG_1807616A0A1W2PRN6 198 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 SMIM23A6NLE4 172 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 VGLL3A8MV65 326 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 M0R1W7 72 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 F2RL2O00254 374 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 ACOT8O14734 319 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 RER1O15258 196 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 NDUFB3O43676 98 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 SHBGP04278 402 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 GRPP07492 148 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 FAM153BP0C7A2 387 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 NR2C1P13056 603 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 AQP1P29972 269 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 THBS3P49746 956 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 GK2Q14410 553 aaPredicted RBP6.63□□□□□ -1.35
CLIP1-206ENST00000535290 OR8G1Q15617 311 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 ENTPD8Q5MY95 495 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 RBM45Q8IUH3 476 aaKnown RBP6.63□□□□□ -1.35
CLIP1-206ENST00000535290 SMYD1Q8NB12 490 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 OR6T1Q8NGN1 323 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 ADAMTS16Q8TE57 1224 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 ACOT11Q8WXI4 607 aaPredicted RBP6.63□□□□□ -1.35
CLIP1-206ENST00000535290 H1FXQ92522 213 aaKnown RBP6.63□□□□□ -1.35
CLIP1-206ENST00000535290 DUS3LQ96G46 650 aaKnown RBP6.63□□□□□ -1.35
CLIP1-206ENST00000535290 WACQ9BTA9 647 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 HCAR1Q9BXC0 346 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 MYLK2Q9H1R3 596 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 ADA2Q9NZK5 511 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 SLC13A4Q9UKG4 626 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 SLC7A7Q9UM01 511 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 KIAA1109Q2LD37 5005 aa6.63□□□□□ -1.35
CLIP1-206ENST00000535290 PRORSD1PA6NEY8 169 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 NPIPB13A6NJU9 1138 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 A6NLC8 198 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 NPIPB4C9JG80 1138 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.62□□□□□ -1.35
CLIP1-206ENST00000535290 H7C1C5 153 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 CLIC1O00299 241 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 JTBO76095 146 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 OR7A10O76100 309 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 ALDOBP05062 364 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 TSPAN19P0C672 248 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 TGM4P49221 684 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 LUMP51884 338 aaPredicted RBP6.62□□□□□ -1.35
CLIP1-206ENST00000535290 LCN6P62502 163 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 CDK6Q00534 326 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 ECH1Q13011 328 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 PCK2Q16822 640 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 MICBQ29980 383 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 RSPO1Q2MKA7 263 aaPredicted RBP6.62□□□□□ -1.35
CLIP1-206ENST00000535290 LRRC10Q5BKY1 277 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 RABL3Q5HYI8 236 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 OGFOD2Q6N063 350 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 REEP3Q6NUK4 255 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 C18orf65Q6ZTR6 163 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 SLC36A1Q7Z2H8 476 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 LHFPL4Q7Z7J7 247 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 KRT73Q86Y46 540 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 OR5T2Q8NGG2 359 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 OR4D11Q8NGI4 311 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 PFN4Q8NHR9 129 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 LRRC8CQ8TDW0 803 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 SPRYD4Q8WW59 207 aaPredicted RBP6.62□□□□□ -1.35
CLIP1-206ENST00000535290 SLCO4A1Q96BD0 722 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 LYZL4Q96KX0 146 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 ZBTB18Q99592 522 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 PRSS27Q9BQR3 290 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 ZNF649Q9BS31 505 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 SPATA5L1Q9BVQ7 753 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 VSX1Q9NZR4 365 aaPredicted RBP6.62□□□□□ -1.35
CLIP1-206ENST00000535290 NDUFAF1Q9Y375 327 aa6.62□□□□□ -1.35
CLIP1-206ENST00000535290 A0A1W2PQ09 198 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 TRAPPC13A5PLN9 417 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 H0YAE9 185 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms