RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 DLL4Q9NR61 685 aa11.93□□□□□ -0.5
VPS11-205ENST00000534551 CLN6Q9NWW5 311 aa11.93□□□□□ -0.5
VPS11-205ENST00000534551 HAO2Q9NYQ3 351 aa11.93□□□□□ -0.5
VPS11-205ENST00000534551 TREM2Q9NZC2 230 aa11.93□□□□□ -0.5
VPS11-205ENST00000534551 PLSCR5A0PG75 271 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 IQCF6A8MYZ5 107 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 ZNF670-ZNF695F2Z2N8 137 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 H0YL77 283 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 MLNRO43193 412 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 RAC2P15153 192 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 SELEP16581 610 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 SLC15A1P46059 708 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 MTNR1AP48039 350 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 ADARB1P78563 741 aaKnown RBP11.92□□□□□ -0.5
VPS11-205ENST00000534551 ZNF85Q03923 595 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 OCLNQ16625 522 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 CLEC2AQ6UVW9 174 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 PGAP1Q75T13 922 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 OR2Z1Q8NG97 314 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 OR5L1Q8NGL2 311 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 C10orf105Q8TEF2 133 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 TRUB1Q8WWH5 349 aaKnown RBP11.92□□□□□ -0.5
VPS11-205ENST00000534551 PPP1R14AQ96A00 147 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 PGAM5Q96HS1 289 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 LYZL4Q96KX0 146 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 MS4A5Q9H3V2 200 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 FAM206AQ9NX38 181 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 DCAF16Q9NXF7 216 aa11.92□□□□□ -0.5
VPS11-205ENST00000534551 MRM2Q9UI43 246 aaKnown RBP11.92□□□□□ -0.5
VPS11-205ENST00000534551 A0A096LNT2 108 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 SRSF10O75494 262 aaKnown RBP11.91□□□□□ -0.5
VPS11-205ENST00000534551 PNPP00491 289 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 HLA-DPB1P04440 258 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 COL8A2P25067 703 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 CAPGP40121 348 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 ROM1Q03395 351 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 MALLQ13021 153 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 TIGD6Q17RP2 521 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 C6orf52Q5T4I8 152 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.91□□□□□ -0.5
VPS11-205ENST00000534551 LURAP1LQ8IV03 231 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 C1orf174Q8IYL3 243 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 ZNF679Q8IYX0 411 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 DHRSXQ8N5I4 330 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 RHOXF1Q8NHV9 184 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 UBASH3BQ8TF42 649 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 NEU4Q8WWR8 484 aaPredicted RBP11.91□□□□□ -0.5
VPS11-205ENST00000534551 FAM168AQ92567 244 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 RFKQ969G6 155 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 LGALS12Q96DT0 336 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 ELMOD3Q96FG2 381 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 REEP6Q96HR9 211 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 COX4I2Q96KJ9 171 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 COG8Q96MW5 612 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 BPESC1Q9GZL8 116 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 PPP1R3EQ9H7J1 279 aa11.91□□□□□ -0.5
VPS11-205ENST00000534551 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.91□□□□□ -0.5
VPS11-205ENST00000534551 hCG_38984A0A1B0GV85 526 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 CD300LBA8K4G0 201 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 H3BSH0 61 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 J3QRE1 110 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 TPD52L2O43399 206 aaKnown RBP11.9□□□□□ -0.5
VPS11-205ENST00000534551 RP2O75695 350 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 RPP14O95059 124 aaKnown RBP11.9□□□□□ -0.5
VPS11-205ENST00000534551 ATP6V1G2O95670 118 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 ERCC1P07992 297 aaPredicted RBP11.9□□□□□ -0.5
VPS11-205ENST00000534551 CD99P14209 185 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 ATP6V1E1P36543 226 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 PDLIM4P50479 330 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 RIDAP52758 137 aaKnown RBP11.9□□□□□ -0.5
VPS11-205ENST00000534551 POU4F2Q12837 409 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 TP53I3Q53FA7 332 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 SLC25A30Q5SVS4 291 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 MEDAGQ5VYS4 303 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 KCTD18Q6PI47 426 aaPredicted RBP11.9□□□□□ -0.5
VPS11-205ENST00000534551 ITLN1Q8WWA0 313 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 SGK3Q96BR1 496 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 REPIN1Q9BWE0 567 aaKnown RBP11.9□□□□□ -0.5
VPS11-205ENST00000534551 MROQ9BYG7 248 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 GSX1Q9H4S2 264 aaPredicted RBP11.9□□□□□ -0.5
VPS11-205ENST00000534551 SAP30LQ9HAJ7 183 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 C8orf4Q9NR00 106 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 ACOXLQ9NUZ1 547 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 GPR160Q9UJ42 338 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 GTF2A1LQ9UNN4 478 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 MYRFQ9Y2G1 1151 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 TMEM14AQ9Y6G1 99 aa11.9□□□□□ -0.5
VPS11-205ENST00000534551 TMEM269A0A1B0GVZ9 245 aa11.89□□□□□ -0.51
VPS11-205ENST00000534551 GGT3PA6NGU5 568 aa11.89□□□□□ -0.51
VPS11-205ENST00000534551 F5H5P2 479 aa11.89□□□□□ -0.51
VPS11-205ENST00000534551 XRCC2O43543 280 aa11.89□□□□□ -0.51
VPS11-205ENST00000534551 MT-ND5P03915 603 aa11.89□□□□□ -0.51
VPS11-205ENST00000534551 OR2T7P0C7T2 308 aa11.89□□□□□ -0.51
VPS11-205ENST00000534551 ACKR3P25106 362 aa11.89□□□□□ -0.51
VPS11-205ENST00000534551 PSMB10P40306 273 aa11.89□□□□□ -0.51
VPS11-205ENST00000534551 TNFAIP6P98066 277 aaPredicted RBP11.89□□□□□ -0.51
VPS11-205ENST00000534551 FAM3AP98173 230 aa11.89□□□□□ -0.51
VPS11-205ENST00000534551 HOXA4Q00056 320 aaPredicted RBP11.89□□□□□ -0.51
VPS11-205ENST00000534551 CDK5R2Q13319 367 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms