RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 FAM49BQ9NUQ9 324 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 IMP3Q9NV31 184 aaKnown RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PAK1IP1Q9NWT1 392 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PRPF19Q9UMS4 504 aaKnown RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 POLDIP2Q9Y2S7 368 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 TIMM10BQ9Y5J6 103 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 A0A087WWV3 80 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 LRP5LA4QPB2 252 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF840PA6NDX5 716 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ARHGEF33A8MVX0 844 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 A8MXK9 166 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 NPIPA7E9PJI5 369 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 OR10H3O60404 316 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 HCN1O60741 890 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 SCN2BO60939 215 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 LYPLA1O75608 230 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 OR2J3O76001 311 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 GADD45GO95257 159 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 RPLP0P05388 317 aaKnown RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 MELTFP08582 738 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 METTL15P1P0C7V9 234 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 NPIPA8P0DM63 369 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ADORA3P0DMS8 318 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 HLA-EP13747 358 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 FOLR2P14207 255 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 RAB3BP20337 219 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 HLA-DMAP28067 261 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 FMO3P31513 532 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 S100A11P31949 105 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ARRB1P49407 418 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 UBE2G2P60604 165 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 OC90Q02509 493 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 RBBP4Q09028 425 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 CRMP1Q14194 572 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 SLC17A1Q14916 467 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ATP6AP1Q15904 470 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 HAGHQ16775 308 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 NDUFAF6Q330K2 333 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 CELF3Q5SZQ8 465 aaKnown RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 AVPI1Q5T686 147 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ACSM5Q6NUN0 579 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 FAHD2BQ6P2I3 314 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 MBOAT1Q6ZNC8 495 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ARCQ7LC44 396 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ASCL5Q7RTU5 278 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 APTXQ7Z2E3 356 aaKnown RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF283Q8N7M2 679 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 C16orf78Q8WTQ4 265 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 UPRTQ96BW1 309 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 FAHD2AQ96GK7 314 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 MBOAT7Q96N66 472 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 OR52B2Q96RD2 323 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 KLF6Q99612 283 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 APOOQ9BUR5 198 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 DUSP16Q9BY84 665 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 TM6SF2Q9BZW4 377 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 PCBD2Q9H0N5 130 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 TRABDQ9H4I3 376 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 REEP4Q9H6H4 257 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 NRN1Q9NPD7 142 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 GHRLQ9UBU3 117 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 RWDD2AQ9UIY3 292 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF225Q9UK10 706 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 MOKQ9UQ07 419 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 EYSQ5T1H1 3165 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 TRBV11-1A0A0K0K1C0 115 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 A0A1B0GW55 424 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 A0A1W2PPE3 182 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 CIB4A0PJX0 185 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 FBLL1A6NHQ2 334 aaKnown RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ERI2A8K979 691 aaKnown RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 MKRN2OSH3BPM6 223 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 TMX2-CTNND1H3BSU7 103 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF195O14628 629 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 B3GAT3O94766 335 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 DUX4L2P0CJ85 424 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 DUX4L3P0CJ86 424 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 DUX4L4P0CJ87 422 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 DUX4L5P0CJ88 424 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 DUX4L6P0CJ89 424 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 DUX4L7P0CJ90 424 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 MYL2P10916 166 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ANXA3P12429 323 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF25P17030 456 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 GABRR1P24046 479 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ELK4P28324 431 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 GTF2E2P29084 291 aaKnown RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 UQCRFS1P47985 274 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 CRIP2P52943 208 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ATP5J2P56134 94 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 RAP1AP62834 184 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 CSNK1G2P78368 415 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 C1orf61Q13536 156 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 TMED2Q15363 201 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 OR8G1Q15617 311 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 GUK1Q16774 197 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF630Q2M218 657 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 FAM53AQ6NSI3 398 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-210ENST00000534172 ULK3Q6PHR2 472 aa2.95□□□□□ -1.94
CSMD3-210ENST00000534172 SPESP1Q6UW49 350 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms