RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 EGFEM1PQ0D2K5 195 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 C11orf91Q3C1V1 193 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 NAA40Q86UY6 237 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 MICU2Q8IYU8 434 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 FAM216BQ8N7L0 139 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 FNDC8Q8TC99 324 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 SEH1LQ96EE3 360 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 CCL13Q99616 98 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 ROPN1BQ9BZX4 212 aaPredicted RBP9.97□□□□□ -0.81
SVIP-205ENST00000533774 FN3KRPQ9HA64 309 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 ROPN1Q9HAT0 212 aaPredicted RBP9.97□□□□□ -0.81
SVIP-205ENST00000533774 C1orf123Q9NWV4 160 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 ADA2Q9NZK5 511 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 PCDHGB5Q9Y5G0 923 aa9.97□□□□□ -0.81
SVIP-205ENST00000533774 CSMD3Q7Z407 3707 aa9.96□□□□□ -0.81
SVIP-205ENST00000533774 TRAV27A0A087WT01 109 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 C3orf84H3BNL1 204 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 BMXP51813 675 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 UBE2E1P51965 193 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 HIST1H3AP68431 136 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 PIN1Q13526 163 aaPredicted RBP9.96□□□□□ -0.82
SVIP-205ENST00000533774 OR8G1Q15617 311 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 KRTAP27-1Q3LI81 207 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 MESTQ5EB52 335 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 HIST2H3PS2Q5TEC6 136 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 TEX36Q5VZQ5 186 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 DLEU7Q6UYE1 221 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 Q6ZS46 218 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 HIST2H3AQ71DI3 136 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 Q8N2B8 174 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 C11orf65Q8NCR3 313 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 SLC7A13Q8TCU3 470 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 NKX3-1Q99801 234 aaPredicted RBP9.96□□□□□ -0.82
SVIP-205ENST00000533774 WNT10AQ9GZT5 417 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 ATPIF1Q9UII2 106 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 RIMS3Q9UJD0 308 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 ADAM18Q9Y3Q7 739 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 U3KQK5 164 aa9.96□□□□□ -0.82
SVIP-205ENST00000533774 TEX13CA0A0J9YWL9 993 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 A6NIZ1 184 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.95□□□□□ -0.82
SVIP-205ENST00000533774 SNRPBP14678 240 aaKnown RBP9.95□□□□□ -0.82
SVIP-205ENST00000533774 RAP1BP61224 184 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 RAP1AP62834 184 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 IFFO1Q0D2I5 559 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 MEP1BQ16820 701 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 LRRC75BQ2VPJ9 315 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 WDR38Q5JTN6 314 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 NKAPLQ5M9Q1 402 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 C11orf53Q8IXP5 236 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 OR51A7Q8NH64 312 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 C8orf46Q8TAG6 207 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 SLCO4A1Q96BD0 722 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 ZBTB9Q96C00 473 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 SPDL1Q96EA4 605 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 Q96M85 177 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 ZNF583Q96ND8 569 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 OR5M11Q96RB7 305 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 DDOQ99489 341 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 DCTN5Q9BTE1 182 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 HCAR1Q9BXC0 346 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 NPFFR1Q9GZQ6 430 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 MEGF9Q9H1U4 602 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 VSX1Q9NZR4 365 aaPredicted RBP9.95□□□□□ -0.82
SVIP-205ENST00000533774 PRPF19Q9UMS4 504 aaKnown RBP9.95□□□□□ -0.82
SVIP-205ENST00000533774 COA3Q9Y2R0 106 aaPredicted RBP9.95□□□□□ -0.82
SVIP-205ENST00000533774 LHFPL6Q9Y693 200 aa9.95□□□□□ -0.82
SVIP-205ENST00000533774 STARD9Q9P2P6 4700 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 EVPLLA8MZ36 301 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 ACOT8O14734 319 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 TFF1P04155 84 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 GRPP07492 148 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 ACSM4P0C7M7 580 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 IFI30P13284 250 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 MRPL19P49406 292 aaKnown RBP9.94□□□□□ -0.82
SVIP-205ENST00000533774 TAS2R41P59536 307 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 LSM6P62312 80 aaKnown RBP9.94□□□□□ -0.82
SVIP-205ENST00000533774 ACSM1Q08AH1 577 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 PCK2Q16822 640 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 TMEM95Q3KNT9 176 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 CASC10Q5T4H9 136 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 CORO6Q6QEF8 472 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 CMTM4Q8IZR5 234 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 OR51G2Q8NGK0 314 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 BPIFA2Q96DR5 249 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 COQ7Q99807 217 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 PAIP2Q9BPZ3 127 aaKnown RBP9.94□□□□□ -0.82
SVIP-205ENST00000533774 ADAT1Q9BUB4 502 aaKnown RBP9.94□□□□□ -0.82
SVIP-205ENST00000533774 SSU72Q9NP77 194 aaKnown RBP9.94□□□□□ -0.82
SVIP-205ENST00000533774 TRIM36Q9NQ86 728 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 INPP5EQ9NRR6 644 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 NDUFAF1Q9Y375 327 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 MED31Q9Y3C7 131 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 CAPN7Q9Y6W3 813 aa9.94□□□□□ -0.82
SVIP-205ENST00000533774 PRSS37A4D1T9 235 aa9.93□□□□□ -0.82
SVIP-205ENST00000533774 OR5F1O95221 314 aa9.93□□□□□ -0.82
SVIP-205ENST00000533774 TGM4P49221 684 aa9.93□□□□□ -0.82
SVIP-205ENST00000533774 MTPNP58546 118 aa9.93□□□□□ -0.82
SVIP-205ENST00000533774 CD83Q01151 205 aa9.93□□□□□ -0.82
SVIP-205ENST00000533774 IKZF1Q13422 519 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms