RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 FAM71F1Q96KD3 344 aaPredicted RBP13.55□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF385AQ96PM9 386 aaKnown RBP13.55□□□□□ -0.24
CACNA1E-208ENST00000533229 UCN2Q96RP3 112 aa13.55□□□□□ -0.24
CACNA1E-208ENST00000533229 SLC25A21Q9BQT8 299 aaPredicted RBP13.55□□□□□ -0.24
CACNA1E-208ENST00000533229 NICN1Q9BSH3 213 aa13.55□□□□□ -0.24
CACNA1E-208ENST00000533229 EDEM2Q9BV94 578 aa13.55□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF416Q9BWM5 594 aa13.55□□□□□ -0.24
CACNA1E-208ENST00000533229 ANGPTL4Q9BY76 406 aa13.55□□□□□ -0.24
CACNA1E-208ENST00000533229 GLTPQ9NZD2 209 aa13.55□□□□□ -0.24
CACNA1E-208ENST00000533229 FBXO4Q9UKT5 387 aa13.55□□□□□ -0.24
CACNA1E-208ENST00000533229 F5H5P2 479 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 ARPC5O15511 151 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 BPNT1O95861 308 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 CX3CR1P49238 355 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 AP2S1P53680 142 aaPredicted RBP13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 SEC61A1P61619 476 aaKnown RBP13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 GFOD2Q3B7J2 385 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 CLLU1Q5K131 121 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 SFRP5Q5T4F7 317 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 AWAT2Q6E213 333 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 RAB12Q6IQ22 244 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 OPN5Q6U736 354 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 TRAPPC6BQ86SZ2 158 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF584Q8IVC4 421 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 TMEM104Q8NE00 496 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 JSRP1Q96MG2 331 aaPredicted RBP13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 GUCD1Q96NT3 240 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 IER2Q9BTL4 223 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 SH2D2AQ9NP31 389 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 TMEM14DPA8MWL7 114 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 H3BUI4 141 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 SHOXO15266 292 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 PMS2P2O95744 297 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 LIFP15018 202 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF20P17024 532 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 LY6G6FQ5SQ64 297 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 PEAR1Q5VY43 1037 aaPredicted RBP13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 RAET1LQ5VY80 246 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 FAM57BQ71RH2 274 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 DTX1Q86Y01 620 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 PAQR8Q8TEZ7 354 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 NTNG2Q96CW9 530 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 C1orf147Q96MC9 270 aaPredicted RBP13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 DHRS9Q9BPW9 319 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 SELENOIQ9C0D9 397 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 MOB1AQ9H8S9 216 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF160Q9HCG1 818 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 MAB21L2Q9Y586 359 aa13.54□□□□□ -0.24
CACNA1E-208ENST00000533229 PHF3Q92576 2039 aaKnown RBP13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 A0A0A6YYD4 124 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 YKT6O15498 198 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 CD63P08962 238 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 POU3F2P20265 443 aaPredicted RBP13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 FKBP2P26885 142 aaKnown RBP13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 OR3A4PP47883 348 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 MC2RQ01718 297 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 EXT1Q16394 746 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 SGCAQ16586 387 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 TRIM61Q5EBN2 209 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 HDDC2Q7Z4H3 204 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 OR2Y1Q8NGV0 311 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 M1APQ8TC57 530 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 UPB1Q9UBR1 384 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF107Q9UII5 783 aaPredicted RBP13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 VSIG4Q9Y279 399 aa13.53□□□□□ -0.24
CACNA1E-208ENST00000533229 LOC100509620A0A075B734 347 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 A0A087WZY1 265 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 A0A1W2PP11 408 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 LIPCP11150 499 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF250P15622 560 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 SSR4P51571 173 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 CAPZA1P52907 286 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 C11orf88Q6PI97 169 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 GLIPR1L1Q6UWM5 242 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF101Q8IZC7 436 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF283Q8N7M2 679 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 GSX2Q9BZM3 304 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 LPAR5Q9H1C0 372 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 SMOC1Q9H4F8 434 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 ZNF230Q9UIE0 474 aaPredicted RBP13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 KCNK7Q9Y2U2 307 aa13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 TNRC6BQ9UPQ9 1833 aaKnown RBP13.52□□□□□ -0.24
CACNA1E-208ENST00000533229 FXYD6-FXYD2A0A087WZ82 144 aa13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 IGKV1-9A0A0C4DH69 117 aa13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 C9J4A7 227 aa13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 SMAD9O15198 467 aaKnown RBP13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 SSX5O60225 188 aa13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 WDPCPO95876 746 aa13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 CCL1P22362 96 aa13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 DSCR4P56555 118 aaPredicted RBP13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 CXADRP78310 365 aa13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 DHRS2Q13268 280 aa13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 HLXQ14774 488 aaPredicted RBP13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 NHLRC3Q5JS37 347 aa13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 RPS19BP1Q86WX3 136 aaKnown RBP13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 C12orf45Q8N5I9 185 aaPredicted RBP13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 TMEM156Q8N614 296 aa13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 OR10R2Q8NGX6 335 aa13.52□□□□□ -0.25
CACNA1E-208ENST00000533229 CCDC120Q96HB5 630 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms