RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 LYPD2Q6UXB3 125 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 DEFB107AQ8IZN7 70 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 OR9Q2Q8NGE9 314 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 SLC25A28Q96A46 364 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 TRIM15Q9C019 465 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 SLC22A4Q9H015 551 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 NDE1Q9NXR1 346 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 IL20Q9NYY1 176 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 CLN8Q9UBY8 286 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 NOP16Q9Y3C1 178 aaKnown RBP14.04□□□□□ -0.16
CPSF1-207ENST00000531727 PCDHGB1Q9Y5G3 927 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 IGHV3OR16-10A0A075B7F0 116 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 TRAV40A0A0B4J280 105 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 TVP23AA6NH52 213 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 CD300LBA8K4G0 201 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 CLDN34H7C241 214 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 TNFRSF11BO00300 401 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 PHYHO14832 338 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 GMDSO60547 372 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 PSKH1P11801 424 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 ZNF92Q03936 586 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 MPPED2Q15777 294 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 SNAI3Q3KNW1 292 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 ZNF362Q5T0B9 420 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-207ENST00000531727 WDR25Q64LD2 544 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-207ENST00000531727 ZNF770Q6IQ21 691 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-207ENST00000531727 LYPD4Q6UWN0 246 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 DRAM2Q6UX65 266 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 ZNF841Q6ZN19 808 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 RASSF6Q6ZTQ3 369 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 SLC37A3Q8NCC5 494 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 OR4C15Q8NGM1 316 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 OR8D4Q8NGM9 314 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 ZNRF4Q8WWF5 429 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 NUDT16L1Q9BRJ7 211 aaKnown RBP14.03□□□□□ -0.16
CPSF1-207ENST00000531727 ADAT1Q9BUB4 502 aaKnown RBP14.03□□□□□ -0.16
CPSF1-207ENST00000531727 UFSP2Q9NUQ7 469 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 COMMD3-BMI1R4GMX3 469 aa14.03□□□□□ -0.16
CPSF1-207ENST00000531727 PTBP3O95758 552 aaKnown RBP14.02□□□□□ -0.17
CPSF1-207ENST00000531727 GASTP01350 101 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 PSMB10P40306 273 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 MXRA7P84157 204 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 SLC9A3R2Q15599 337 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 SHISA2Q6UWI4 295 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 CYP2R1Q6VVX0 501 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 DCXRQ7Z4W1 244 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 FITM2Q8N6M3 262 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 C19orf18Q8NEA5 215 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 OR51L1Q8NGJ5 315 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 OR9Q1Q8NGQ5 310 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 OR2AE1Q8NHA4 323 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 FN3KRPQ9HA64 309 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 TBC1D23Q9NUY8 699 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 ACTR3BQ9P1U1 418 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 RNF7Q9UBF6 113 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 ARL2BPQ9Y2Y0 163 aa14.02□□□□□ -0.17
CPSF1-207ENST00000531727 SOX21Q9Y651 276 aaPredicted RBP14.02□□□□□ -0.17
CPSF1-207ENST00000531727 C5orf63A6NC05 138 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 GGT3PA6NGU5 568 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 DCTN3O75935 186 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 CCNB2O95067 398 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 ATP6V1B2P21281 511 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 ANOS1P23352 680 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 MAGEA2P43356 314 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 KCNJ8Q15842 424 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 PCK2Q16822 640 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 GLYATL3Q5SZD4 288 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 LNX2Q8N448 690 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 PLPP7Q8NBV4 271 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 COPS4Q9BT78 406 aa14.01□□□□□ -0.17
CPSF1-207ENST00000531727 MRPL15Q9P015 296 aaKnown RBP14.01□□□□□ -0.17
CPSF1-207ENST00000531727 DOCK11Q5JSL3 2073 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 C22orf46C9J442 243 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 LGALS8O00214 317 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 TMPRSS2O15393 492 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 ENSAO43768 121 aaKnown RBP14□□□□□ -0.17
CPSF1-207ENST00000531727 SPARCP09486 303 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 FMO3P31513 532 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 ENTPD1P49961 510 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 NPY4RP50391 375 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 PRKXP51817 358 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 FGF12P61328 243 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 HOXA4Q00056 320 aaPredicted RBP14□□□□□ -0.17
CPSF1-207ENST00000531727 CRMP1Q14194 572 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 PIGWQ7Z7B1 504 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 SPERTQ8NA61 448 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 AQP11Q8NBQ7 271 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 SLAMF6Q96DU3 332 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 TECTBQ96PL2 329 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 KCNJ15Q99712 375 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 TSSK6Q9BXA6 273 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 NMNAT2Q9BZQ4 307 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 OPA3Q9H6K4 179 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 CTSZQ9UBR2 303 aa14□□□□□ -0.17
CPSF1-207ENST00000531727 MDFIC2A0A1B0GVS7 189 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 ZNF878C9JN71 531 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 GYPBP06028 91 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 SPI1P17947 270 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 MNAT1P51948 309 aa13.99□□□□□ -0.17
CPSF1-207ENST00000531727 SLC25A1P53007 311 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms