RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 MYLPFQ96A32 169 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 CAPZA3Q96KX2 299 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 TSNAXQ99598 290 aaKnown RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 FEM1AQ9BSK4 669 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 COMMD4Q9H0A8 199 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 ARV1Q9H2C2 271 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 BOLA2Q9H3K6 86 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 NMNAT1Q9HAN9 279 aaPredicted RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 UGT1A10Q9HAW8 530 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 UGT1A8Q9HAW9 530 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 HMG20AQ9NP66 347 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 IFT46Q9NQC8 304 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 BIN3Q9NQY0 253 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 SPANXB1Q9NS25 103 aaPredicted RBP2.69□□□□□ -1.98
PTPRK-220ENST00000531466 CLN6Q9NWW5 311 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 IMPAD1Q9NX62 359 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 COA4Q9NYJ1 87 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 THYN1Q9P016 225 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 SEC14L4Q9UDX3 406 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF391Q9UJN7 358 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 NSG2Q9Y328 171 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 HSPB11Q9Y547 144 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 V9GYY9 64 aa2.69□□□□□ -1.98
PTPRK-220ENST00000531466 NCOA1Q15788 1441 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 TRBV5-4A0A0C4DH59 114 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 A0A1B0GV90 55 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 VSTM2BA6NLU5 285 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 OR11H12B2RN74 326 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 H3BTX0 84 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 K7EP13 123 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 M0QXV9 152 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 KCNK1O00180 336 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 KPNA4O00629 521 aaPredicted RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 TGOLN2O43493 480 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 SYT7O43581 403 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 SSNA1O43805 119 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 KLRC4O43908 158 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 HPGDSO60760 199 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 SLC19A2O60779 497 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 SUPT7LO94864 414 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 NDUFA7O95182 113 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 RCBTB2O95199 551 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ACTL6AO96019 429 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 CCNE2O96020 404 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 HLA-AP01891 365 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ORM1P02763 201 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 MT-ND4P03905 459 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ALDOBP05062 364 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ISG15P05161 165 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 UQCRBP14927 111 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 HIST1H1CP16403 213 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ATP6V1B2P21281 511 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 MDKP21741 143 aaPredicted RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 IVDP26440 423 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 GABRR2P28476 465 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 CD1CP29017 333 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 SHMT2P34897 504 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 CEACAM6P40199 344 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 GPR1P46091 355 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 RPL5P46777 297 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 CSNK1A1P48729 337 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 CX3CR1P49238 355 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 TTPAP49638 278 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 UBE2KP61086 200 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 OSTNP61366 133 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 NAA20P61599 178 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 DYNLL1P63167 89 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 KLRC3Q07444 240 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ST3GAL3Q11203 375 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 GPR50Q13585 617 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 GK3PQ14409 553 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 TSNQ15631 228 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 MRPL23Q16540 153 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 CCL14Q16627 93 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 NDUFA9Q16795 377 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 DGUOKQ16854 277 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ISXQ2M1V0 245 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 RNASE10Q5GAN6 216 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 PPM1LQ5SGD2 360 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 C9orf64Q5T6V5 341 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 UBE2UQ5VVX9 321 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF776Q68DI1 518 aaPredicted RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 MED27Q6P2C8 311 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 Q7L0L9 218 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 SLC36A1Q7Z2H8 476 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 OR2W3Q7Z3T1 314 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 PARGQ86W56 976 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 UNC93AQ86WB7 457 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 RALGPS2Q86X27 583 aaPredicted RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ERI1Q8IV48 349 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ZBTB8OSQ8IWT0 167 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 RIMKLAQ8IXN7 391 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF283Q8N7M2 679 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 CLDN22Q8N7P3 220 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 LRRC75AQ8NAA5 344 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 LFNGQ8NES3 379 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 OR11H1Q8NG94 326 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 OR4F15Q8NGB8 312 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 OR4D5Q8NGN0 318 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms