RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 KRCC1Q9NPI7 259 aaPredicted RBP15.28■□□□□ 0.04
SSSCA1-206ENST00000531405 RNF7Q9UBF6 113 aa15.28■□□□□ 0.04
SSSCA1-206ENST00000531405 CYB5R1Q9UHQ9 305 aa15.28■□□□□ 0.04
SSSCA1-206ENST00000531405 V9GYQ6 96 aa15.28■□□□□ 0.04
SSSCA1-206ENST00000531405 CENPVL3A0A0U1RRI6 287 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 A0A1B0GUS0 222 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 C5orf63A6NC05 138 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 OR6C68A6NDL8 312 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 ZNF879B4DU55 563 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 SLC6A6P31641 620 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 RPS27P42677 84 aaKnown RBP15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 NPY4RP50391 375 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 BPIFB3P59826 476 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 KRTAP10-3P60369 221 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 ECH1Q13011 328 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 RFX4Q33E94 735 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 SNAI3Q3KNW1 292 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 ZNF362Q5T0B9 420 aaPredicted RBP15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 ZBTB46Q86UZ6 589 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 SDR9C7Q8NEX9 313 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 OR2AE1Q8NHA4 323 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 MAP6Q96JE9 813 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 CCT8L2Q96SF2 557 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 CITED1Q99966 193 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 ADAT1Q9BUB4 502 aaKnown RBP15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 IFT27Q9BW83 186 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 FN3KRPQ9HA64 309 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 EFCAB1Q9HAE3 211 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 ARGLU1Q9NWB6 273 aaPredicted RBP15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 MRPL22Q9NWU5 206 aaKnown RBP15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 ERVK-18Q9QC07 812 aa15.27■□□□□ 0.04
SSSCA1-206ENST00000531405 CLPSL1A2RUU4 121 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 CD300LBA8K4G0 201 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 LGALS8O00214 317 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 P2RY10O00398 339 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 TNFRSF13BO14836 293 aaPredicted RBP15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 ADAM20O43506 726 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 FCN3O75636 299 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 NDUFA7O95182 113 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 TPTEP56180 551 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 ZNF92Q03936 586 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 OR8B8Q15620 311 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 SLC36A3Q495N2 470 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 GLYATQ6IB77 296 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 FAM71F1Q96KD3 344 aaPredicted RBP15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 WDFY2Q96P53 400 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 KIF17Q9P2E2 1029 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 ABCD2Q9UBJ2 740 aa15.26■□□□□ 0.03
SSSCA1-206ENST00000531405 M0R135 149 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 ARPC3O15145 178 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 GYPAP02724 150 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 NOS3P29474 1203 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 PSME3P61289 254 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 KRT72Q14CN4 511 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 CD276Q5ZPR3 534 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 HACD2Q6Y1H2 254 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 ZNF826PQ6ZT77 177 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 RHOUQ7L0Q8 258 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 TMEM86BQ8N661 226 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 RNF148Q8N7C7 305 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 GATAD2BQ8WXI9 593 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 LHX4Q969G2 390 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 ZNF799Q96GE5 643 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 ACOXLQ9NUZ1 547 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 DCAF13Q9NV06 445 aaKnown RBP15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 C1orf123Q9NWV4 160 aa15.25■□□□□ 0.03
SSSCA1-206ENST00000531405 OOEPA6NGQ2 149 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 GADD45GO95257 159 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 PTBP3O95758 552 aaKnown RBP15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 IGHV4-59P01825 116 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 PSKH1P11801 424 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 PYCR1P32322 319 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 SPIBQ01892 262 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 POU4F2Q12837 409 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 KCNJ8Q15842 424 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 OCLNQ16625 522 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 GLYATL3Q5SZD4 288 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 SLC35F1Q5T1Q4 408 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 METTL11BQ5VVY1 283 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 LYPD4Q6UWN0 246 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 ZNF620Q6ZNG0 422 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 PDZD9Q8IXQ8 264 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 LNX2Q8N448 690 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 PNLDC1Q8NA58 520 aaKnown RBP15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 SSMEM1Q8WWF3 244 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 NSRP1Q9H0G5 558 aaKnown RBP15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 SIRPDQ9H106 197 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 SAMD4AQ9UPU9 718 aaKnown RBP15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 POMT1Q9Y6A1 747 aa15.24■□□□□ 0.03
SSSCA1-206ENST00000531405 IGHV3OR15-7A0A075B7D8 119 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 IGHV1-69DA0A0B4J2H0 117 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 A0A0U1RQK1 487 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 GGT3PA6NGU5 568 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 TVP23AA6NH52 213 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 OR10H3O60404 316 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 GMDSO60547 372 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 IGHV1-69P01742 117 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 LIPFP07098 398 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 GRPP07492 148 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 ARF6P62330 175 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms