RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PAQR8Q8TEZ7 354 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 MR1Q95460 341 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 SLC6A7Q99884 636 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 CDCP1Q9H5V8 836 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 FARSAQ9Y285 508 aaKnown RBP15.22■□□□□ 0.03
BRCA2-204ENST00000530893 PTRH2Q9Y3E5 179 aaKnown RBP15.22■□□□□ 0.03
BRCA2-204ENST00000530893 B3GALNT1O75752 331 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 KLF7O75840 302 aaPredicted RBP15.22■□□□□ 0.03
BRCA2-204ENST00000530893 TDGF1P13385 188 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 RPA2P15927 270 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 PPP3CBP16298 524 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 ENPP1P22413 925 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 CX3CR1P49238 355 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 SSR4P51571 173 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 PRKXP51817 358 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 UBE2MP61081 183 aaKnown RBP15.22■□□□□ 0.03
BRCA2-204ENST00000530893 MC2RQ01718 297 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 ZFP36L1Q07352 338 aaKnown RBP15.22■□□□□ 0.03
BRCA2-204ENST00000530893 SRSF4Q08170 494 aaKnown RBP15.22■□□□□ 0.03
BRCA2-204ENST00000530893 HLXQ14774 488 aaPredicted RBP15.22■□□□□ 0.03
BRCA2-204ENST00000530893 DCAF12L2Q5VW00 463 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 FAHD2BQ6P2I3 314 aaPredicted RBP15.22■□□□□ 0.03
BRCA2-204ENST00000530893 TMUB2Q71RG4 321 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 TMED4Q7Z7H5 227 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 COMMD7Q86VX2 200 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 COMMD2Q86X83 199 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 KCNG3Q8TAE7 436 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 WDR89Q96FK6 387 aaPredicted RBP15.22■□□□□ 0.03
BRCA2-204ENST00000530893 FAHD2AQ96GK7 314 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 GPR84Q9NQS5 396 aa15.22■□□□□ 0.03
BRCA2-204ENST00000530893 SPEGQ15772 3267 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 RFPL4AA6NLU0 287 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 RFPL4AL1F8VTS6 287 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 RER1O15258 196 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 RAMP1O60894 148 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 CD8AP01732 235 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 PDGFAP04085 211 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 UBBP0CG47 229 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 ZNF17P17021 662 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 CALCRP30988 508 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 CLDN17P56750 224 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 CXADRP78310 365 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 OC90Q02509 493 aaPredicted RBP15.21■□□□□ 0.03
BRCA2-204ENST00000530893 DHRS2Q13268 280 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 SCGB2B2Q4G0G5 96 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 FOXL2NBQ6ZUU3 175 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 NAA11Q9BSU3 229 aaPredicted RBP15.21■□□□□ 0.03
BRCA2-204ENST00000530893 IFT46Q9NQC8 304 aa15.21■□□□□ 0.03
BRCA2-204ENST00000530893 FXYD6-FXYD2A0A087WZ82 144 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 CER1O95813 267 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 GSTP1P09211 210 aaKnown RBP15.21■□□□□ 0.02
BRCA2-204ENST00000530893 LIFP15018 202 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 MSR1P21757 451 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 AGTR1P30556 359 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 CSNK1A1P48729 337 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 CSNK2A1P68400 391 aaPredicted RBP15.21■□□□□ 0.02
BRCA2-204ENST00000530893 LIN54Q6MZP7 749 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 SLC25A42Q86VD7 318 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 ZNF101Q8IZC7 436 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 OR5AS1Q8N127 324 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 OR5M8Q8NGP6 311 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 OR2Y1Q8NGV0 311 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 TMEM54Q969K7 222 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 FXYD6Q9H0Q3 95 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 NELFAQ9H3P2 528 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 SH2D2AQ9NP31 389 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 MED9Q9NWA0 146 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 MRPS28Q9Y2Q9 187 aaKnown RBP15.21■□□□□ 0.02
BRCA2-204ENST00000530893 HS3ST3B1Q9Y662 390 aa15.21■□□□□ 0.02
BRCA2-204ENST00000530893 ABOP16442 354 aa15.2■□□□□ 0.02
BRCA2-204ENST00000530893 HLA-GP17693 338 aa15.2■□□□□ 0.02
BRCA2-204ENST00000530893 GK2Q14410 553 aaPredicted RBP15.2■□□□□ 0.02
BRCA2-204ENST00000530893 LY6G6FQ5SQ64 297 aa15.2■□□□□ 0.02
BRCA2-204ENST00000530893 ARMC10Q8N2F6 343 aa15.2■□□□□ 0.02
BRCA2-204ENST00000530893 ZNF283Q8N7M2 679 aa15.2■□□□□ 0.02
BRCA2-204ENST00000530893 GJC3Q8NFK1 279 aa15.2■□□□□ 0.02
BRCA2-204ENST00000530893 OR4S1Q8NGB4 309 aa15.2■□□□□ 0.02
BRCA2-204ENST00000530893 INTS12Q96CB8 462 aaKnown RBP15.2■□□□□ 0.02
BRCA2-204ENST00000530893 ARL6Q9H0F7 186 aa15.2■□□□□ 0.02
BRCA2-204ENST00000530893 TEX51A0A1B0GUA7 166 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 CRYZL1O95825 349 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 CASRP41180 1078 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 GLIPR1L1Q6UWM5 242 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 CCDC54Q8NEL0 328 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 STEAP2Q8NFT2 490 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 SCARB1Q8WTV0 552 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 CMBLQ96DG6 245 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 CDX2Q99626 313 aaPredicted RBP15.19■□□□□ 0.02
BRCA2-204ENST00000530893 ZNF416Q9BWM5 594 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 LPAR5Q9H1C0 372 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 GHRLQ9UBU3 117 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 C19orf67A6NJJ6 358 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 DNPH1O43598 174 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 IL2RAP01589 272 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 IGLV3-1P01715 115 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 HLA-AP01891 365 aaKnown RBP15.19■□□□□ 0.02
BRCA2-204ENST00000530893 CELA2AP08217 269 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 CD63P08962 238 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 CCL3P10147 92 aa15.19■□□□□ 0.02
BRCA2-204ENST00000530893 CD34P28906 385 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 591.8 ms