RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 COL26A1Q96A83 441 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 LMLNQ96KR4 655 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 NUDT16L1Q9BRJ7 211 aaKnown RBP7.27□□□□□ -1.25
CSDE1-214ENST00000530886 FAAP24Q9BTP7 215 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 TTTY10Q9BZA0 68 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 AURKAIP1Q9NWT8 199 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-214ENST00000530886 KCNE3Q9Y6H6 103 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 SNRNP200O75643 2136 aaKnown RBP7.27□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF264O43296 627 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 NME2P1O60361 137 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 C1orf105O95561 183 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 MAS1P04201 325 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 SRP19P09132 144 aaKnown RBP7.27□□□□□ -1.25
CSDE1-214ENST00000530886 OR13C7P0DN81 318 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 LIPCP11150 499 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 IRF2P14316 349 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 RPL12P30050 165 aaKnown RBP7.27□□□□□ -1.25
CSDE1-214ENST00000530886 BEX3Q00994 111 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 SPEM2Q0P670 501 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 PMPCAQ10713 525 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 NKAIN1Q4KMZ8 207 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 FBXW12Q6X9E4 464 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF836Q6ZNA1 936 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 FOXRED2Q8IWF2 684 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 GCNT2Q8N0V5 402 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 AMER3Q8N944 861 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 DTWD2Q8NBA8 298 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 RCBTB1Q8NDN9 531 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 CASTOR1Q8WTX7 329 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 KCNE4Q8WWG9 221 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 SNX22Q96L94 193 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 G6PC3Q9BUM1 346 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 MTHFD2LQ9H903 347 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-214ENST00000530886 ANAPC10Q9UM13 185 aa7.27□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF705GA8MUZ8 300 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 PRR32B1ATL7 298 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 CXCL11O14625 94 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 KAT7O95251 611 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 HSPB1P04792 205 aaKnown RBP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 SLC35G6P0C7Q6 338 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 PGA4P0DJD7 388 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 PGA5P0DJD9 388 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 FGF5P12034 268 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 RPS4Y1P22090 263 aaKnown RBP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 HMGB2P26583 209 aaKnown RBP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 CAMLGP49069 296 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 PSEN2P49810 448 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 PLAURQ03405 335 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 FDX2Q6P4F2 183 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 DEGS2Q6QHC5 323 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 SMIM15Q7Z3B0 74 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF615Q8N8J6 731 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 EXD3Q8N9H8 876 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF740Q8NDX6 193 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 PLD4Q96BZ4 506 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 Q96M85 177 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF587Q96SQ5 575 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 PYGO2Q9BRQ0 406 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 SRD5A3Q9H8P0 318 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 SEPSECSQ9HD40 501 aaKnown RBP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 TUBD1Q9UJT1 453 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 B4E171 279 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 K7N7A8 449 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 LEFTY2O00292 366 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF708P17019 499 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 NTSP30990 170 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 NAA10P41227 235 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 TSFMP43897 325 aaKnown RBP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 P2RY1P47900 373 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 SLC37A1P57057 533 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 MRPS6P82932 125 aaKnown RBP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 DMWDQ09019 674 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 DUSP8Q13202 625 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 CEBPEQ15744 281 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 AADACL3Q5VUY0 350 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 TANGO2Q6ICL3 276 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 OR4C11Q6IEV9 310 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 NUFIP2Q7Z417 695 aaKnown RBP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 FAM220AQ7Z4H9 259 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 OR4X1Q8NH49 305 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 ORAOV1Q8WV07 137 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 TMEM230Q96A57 120 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 TIFAQ96CG3 184 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 GPR132Q9UNW8 380 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 POLR3KQ9Y2Y1 108 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 MED31Q9Y3C7 131 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 YIPF1Q9Y548 306 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 ATG2AQ2TAZ0 1938 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 A0A0A6YYD5 115 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 RBFOX3A6NFN3 312 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 DHRS7CA6NNS2 312 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 TCF21O43680 179 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 TMPRSS11DO60235 418 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 DEDDO75618 318 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 AGR2O95994 175 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 HOXC12P31275 282 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 SPINT3P49223 89 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 NCBP2P52298 156 aaKnown RBP eCLIP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 DUSP2Q05923 314 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 PNRC1Q12796 327 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms