RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 NRMQ8IXM6 262 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 C11orf44Q8N8P7 122 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 OR4C13Q8NGP0 309 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 OR2T6Q8NHC8 308 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 ST8SIA4Q92187 359 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 C7orf26Q96N11 449 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 SH3GL1Q99961 368 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 EBF4Q9BQW3 602 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 SMURF1Q9HCE7 757 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 RPUSD1Q9UJJ7 312 aaKnown RBP7.4□□□□□ -1.22
VPS11-203ENST00000529545 COA3Q9Y2R0 106 aaPredicted RBP7.4□□□□□ -1.22
VPS11-203ENST00000529545 hCG_1807616A0A1W2PRN6 198 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 A6NLC8 198 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 F5H5K5 113 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 GMDSO60547 372 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 GYPAP02724 150 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 LCATP04180 440 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 RPLP1P05386 114 aaKnown RBP7.39□□□□□ -1.23
VPS11-203ENST00000529545 CA6P23280 308 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 EMX1Q04741 257 aaPredicted RBP7.39□□□□□ -1.23
VPS11-203ENST00000529545 PRKCDQ05655 676 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 MZT1Q08AG7 82 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 DBPQ10586 325 aaPredicted RBP7.39□□□□□ -1.23
VPS11-203ENST00000529545 ECH1Q13011 328 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 KRR1Q13601 381 aaKnown RBP7.39□□□□□ -1.23
VPS11-203ENST00000529545 CYLC2Q14093 348 aaPredicted RBP7.39□□□□□ -1.23
VPS11-203ENST00000529545 GK2Q14410 553 aaPredicted RBP7.39□□□□□ -1.23
VPS11-203ENST00000529545 MESTQ5EB52 335 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 OTPQ5XKR4 325 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 METAP1DQ6UB28 335 aaPredicted RBP7.39□□□□□ -1.23
VPS11-203ENST00000529545 ZNF730Q6ZMV8 503 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 RRM2BQ7LG56 351 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 MRPL21Q7Z2W9 205 aaKnown RBP7.39□□□□□ -1.23
VPS11-203ENST00000529545 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.39□□□□□ -1.23
VPS11-203ENST00000529545 RNF113BQ8IZP6 322 aaKnown RBP7.39□□□□□ -1.23
VPS11-203ENST00000529545 OR13C2Q8NGS9 318 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 SLCO4A1Q96BD0 722 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 CLPTM1LQ96KA5 538 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 PRRC1Q96M27 445 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 Q96M85 177 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 DMRTB1Q96MA1 342 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 ADAT1Q9BUB4 502 aaKnown RBP7.39□□□□□ -1.23
VPS11-203ENST00000529545 FNDC11Q9BVV2 318 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 FAM234AQ9H0X4 552 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 SYT4Q9H2B2 425 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 SEMA6AQ9H2E6 1030 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 RPS6KA6Q9UK32 745 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 ADAM18Q9Y3Q7 739 aa7.39□□□□□ -1.23
VPS11-203ENST00000529545 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.38□□□□□ -1.23
VPS11-203ENST00000529545 MEIOCA2RUB1 952 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 NPFFO15130 113 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 KIR2DS4P43632 304 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 EFNB2P52799 333 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 CRYBA2P53672 197 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 MAGOHP61326 146 aaKnown RBP7.38□□□□□ -1.23
VPS11-203ENST00000529545 TRAM2Q15035 370 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 KCNMB1Q16558 191 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 MICBQ29980 383 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 NSUN5P1Q3KNT7 163 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 ZBED5Q49AG3 693 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 CYBRD1Q53TN4 286 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 GPR139Q6DWJ6 353 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 ERICH5Q6P6B1 374 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 DNM1P34Q6PK57 102 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 COLCA1Q6ZS62 124 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 C1orf122Q6ZSJ8 110 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 SLC36A1Q7Z2H8 476 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 ADCK1Q86TW2 530 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 KLHDC1Q8N7A1 406 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 FAM156AQ8NDB6 213 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 OR2AJ1Q8NGZ0 328 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 TSPEARQ8WU66 669 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 CFHR4Q92496 578 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 TPD52L3Q96J77 140 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 PITX2Q99697 317 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 NMNAT1Q9HAN9 279 aaPredicted RBP7.38□□□□□ -1.23
VPS11-203ENST00000529545 RAB18Q9NP72 206 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 SIRT7Q9NRC8 400 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 C14orf119Q9NWQ9 140 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 AURKAIP1Q9NWT8 199 aaPredicted RBP7.38□□□□□ -1.23
VPS11-203ENST00000529545 C1orf123Q9NWV4 160 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 KAAG1Q9UBP8 84 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 FOXJ3Q9UPW0 622 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 SIGLEC9Q9Y336 463 aa7.38□□□□□ -1.23
VPS11-203ENST00000529545 KMT2CQ8NEZ4 4911 aaKnown RBP7.37□□□□□ -1.23
VPS11-203ENST00000529545 A0A1W2PRD5 423 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 A0A1W2PRF3 423 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 A0A1W2PRM7 423 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 GGT3PA6NGU5 568 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 CD300LBA8K4G0 201 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 SOCS2O14508 198 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 NDUFB3O43676 98 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 PTBP3O95758 552 aaKnown RBP7.37□□□□□ -1.23
VPS11-203ENST00000529545 GRPP07492 148 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 VSIG10L2P0DP72 767 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 CRABP1P29762 137 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 SDHAP31040 664 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 GRK5P34947 590 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 GGT2P36268 569 aa7.37□□□□□ -1.23
VPS11-203ENST00000529545 GPR4P46093 362 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms