RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 GK2Q14410 553 aaPredicted RBP6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 ZMYND11Q15326 602 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 OR8G1Q15617 311 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 C11orf91Q3C1V1 193 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 ARMCX4Q5H9R4 360 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 TMEM255AQ5JRV8 349 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 CLEC12AQ5QGZ9 265 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 CD300LDQ6UXZ3 194 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 C1orf229Q6ZS94 237 aaPredicted RBP6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 SHFQ7M4L6 423 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 MOGAT3Q86VF5 341 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 LINC00346Q8IVM7 164 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 CCDC197Q8NCU1 140 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 SDR9C7Q8NEX9 313 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 OR8B3Q8NGG8 313 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 Q8TCH9 128 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 GIPC3Q8TF64 312 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 RAB40AQ8WXH6 277 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 ZMYND19Q96E35 227 aaPredicted RBP6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 ZNF799Q96GE5 643 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 OR8B2Q96RD0 313 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 KCNJ15Q99712 375 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 SSBP3Q9BWW4 388 aaPredicted RBP6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 MS4A7Q9GZW8 240 aaPredicted RBP6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 TOR3AQ9H497 397 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 ZMAT3Q9HA38 289 aaKnown RBP6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 FN3KRPQ9HA64 309 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 ZNF556Q9HAH1 456 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 CENPMQ9NSP4 180 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 TBC1D23Q9NUY8 699 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 C14orf119Q9NWQ9 140 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 KIF17Q9P2E2 1029 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 ERVK-18Q9QC07 812 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 RNF7Q9UBF6 113 aa6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 SAMHD1Q9Y3Z3 626 aaKnown RBP6.58□□□□□ -1.36
CCDC90B-212ENST00000529312 TRAV38-1A0A0B4J264 116 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 ANKRD30BLA7E2S9 258 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 CD300LBA8K4G0 201 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 F5H0A9 414 aaPredicted RBP6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 F5H5P2 479 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 TRAPPC2LH3BP13 241 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 XRCC2O43543 280 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 GPANK1O95872 356 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 RAP2AP10114 183 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 RPS2P15880 293 aaKnown RBP6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 ZNF3P17036 446 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 PAICSP22234 425 aaKnown RBP6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 PYCR1P32322 319 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 CD200P41217 278 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 MAGEA2P43356 314 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 COMPP49747 757 aaPredicted RBP6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 GYS2P54840 703 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 SRSF2Q01130 221 aaKnown RBP6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 FOXL1Q12952 345 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 PCK2Q16822 640 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 SPRNQ5BIV9 151 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 ZNF362Q5T0B9 420 aaPredicted RBP6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 OTPQ5XKR4 325 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 ZNF770Q6IQ21 691 aaPredicted RBP6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 LCN8Q6JVE9 175 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 CFAP77Q6ZQR2 320 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 DCDC5Q6ZRR9 648 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 NAA40Q86UY6 237 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 FTMTQ8N4E7 242 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 FITM2Q8N6M3 262 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 CYB561A3Q8NBI2 242 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 AQP11Q8NBQ7 271 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 SLC37A3Q8NCC5 494 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 BHLHE23Q8NDY6 225 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 OR52H1Q8NGJ2 320 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 SGMS2Q8NHU3 365 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 SIGLEC11Q96RL6 698 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 TMEM246Q9BRR3 403 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 COPS4Q9BT78 406 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 EGLN3Q9H6Z9 239 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 MMP26Q9NRE1 261 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 MRPL22Q9NWU5 206 aaKnown RBP6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 MRPL15Q9P015 296 aaKnown RBP6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 CLN8Q9UBY8 286 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 OPN4Q9UHM6 478 aa6.57□□□□□ -1.36
CCDC90B-212ENST00000529312 DOCK11Q5JSL3 2073 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 TVP23AA6NH52 213 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 AQP12BA6NM10 295 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 CEACAM18A8MTB9 384 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 ZNF878C9JN71 531 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 H0YL77 283 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 H3BN98 237 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 LGALS8O00214 317 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 ECDO95905 644 aaPredicted RBP6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 CYB5R3P00387 301 aaPredicted RBP6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 CST1P01037 141 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 HLA-DPB1P04440 258 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 SPARCP09486 303 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 ANXA8P13928 327 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 CA6P23280 308 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 HSD11B1P28845 292 aa6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 OTX1P32242 354 aaPredicted RBP6.56□□□□□ -1.36
CCDC90B-212ENST00000529312 CD80P33681 288 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms