RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ASH2LQ9UBL3 628 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 RSL24D1Q9UHA3 163 aaKnown RBP7.18□□□□□ -1.26
SSBP3-212ENST00000528930 KLHL21Q9UJP4 597 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 NDRG4Q9ULP0 352 aaKnown RBP7.18□□□□□ -1.26
SSBP3-212ENST00000528930 POMPQ9Y244 141 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 SAMHD1Q9Y3Z3 626 aaKnown RBP7.18□□□□□ -1.26
SSBP3-212ENST00000528930 LHFPL6Q9Y693 200 aa7.18□□□□□ -1.26
SSBP3-212ENST00000528930 A0A1W2PPW3 197 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 TCRBV3S1A0A5B6 114 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 DHRS12A0PJE2 317 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 OR6C6A6NF89 314 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 RER1O15258 196 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 SGCEO43556 437 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 DOK2O60496 412 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 RENP00797 406 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 CST1P01037 141 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 ERCC1P07992 297 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-212ENST00000528930 TACSTD2P09758 323 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 S100A1P23297 94 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 MAGEB1P43366 347 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 MMP15P51511 669 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 PPP1CBP62140 327 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 TEKQ02763 1124 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 COX10Q12887 443 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 CCNIQ14094 377 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 GGTLC2Q14390 218 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 GK3PQ14409 553 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 CARTPTQ16568 116 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 NKPD1Q17RQ9 610 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 RSPO1Q2MKA7 263 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-212ENST00000528930 ZNF718Q3SXZ3 478 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 SPATA46Q5T0L3 261 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 KPRPQ5T749 579 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-212ENST00000528930 RPL13AP3Q6NVV1 102 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 DNM1P34Q6PK57 102 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 CD300LDQ6UXZ3 194 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 REC114Q7Z4M0 266 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 JAZF1Q86VZ6 243 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 C1orf174Q8IYL3 243 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 LNX2Q8N448 690 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 MINDY2Q8NBR6 621 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 PAPD5Q8NDF8 572 aaKnown RBP7.17□□□□□ -1.26
SSBP3-212ENST00000528930 ZNF540Q8NDQ6 660 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 SDR9C7Q8NEX9 313 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 SLC26A10Q8NG04 563 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 OR10G2Q8NGC3 310 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 OR4Q3Q8NH05 313 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 OR1F12Q8NHA8 337 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 ABHD4Q8TB40 342 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 KLF14Q8TD94 323 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-212ENST00000528930 IPCEF1Q8WWN9 437 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-212ENST00000528930 GTF3AQ92664 365 aaKnown RBP7.17□□□□□ -1.26
SSBP3-212ENST00000528930 BORCS5Q969J3 196 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 YIPF5Q969M3 257 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 SLCO4A1Q96BD0 722 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 NIPSNAP1Q9BPW8 284 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 FN3KQ9H479 309 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 POFUT1Q9H488 388 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 ELOVL3Q9HB03 270 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 ESM1Q9NQ30 184 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 MRPL22Q9NWU5 206 aaKnown RBP7.17□□□□□ -1.26
SSBP3-212ENST00000528930 SLCO1C1Q9NYB5 712 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 NKIRAS2Q9NYR9 191 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 PLEK2Q9NYT0 353 aa7.17□□□□□ -1.26
SSBP3-212ENST00000528930 EIF3KQ9UBQ5 218 aaKnown RBP7.17□□□□□ -1.26
SSBP3-212ENST00000528930 ARRDC5A6NEK1 342 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 KRTAP9-7A8MTY7 169 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 RP2O75695 350 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 SOX14O95416 240 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 DBHP09172 617 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 GSTM3P21266 225 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 GGT2P36268 569 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 HTR5AP47898 357 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 CENPAP49450 140 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 AQP4P55087 323 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 SELENOVP59797 346 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 GLO1Q04760 184 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 PSG7Q13046 419 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 FLOT2Q14254 428 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 TRIP10Q15642 601 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 MOGQ16653 247 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 NDUFA5Q16718 116 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 KRTAP27-1Q3LI81 207 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 KCTD21Q4G0X4 260 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 SLC18B1Q6NT16 456 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 CORO6Q6QEF8 472 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.16□□□□□ -1.26
SSBP3-212ENST00000528930 PACRGLQ8N7B6 248 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 ZDHHC22Q8N966 263 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 CYB561A3Q8NBI2 242 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 SLC37A3Q8NCC5 494 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 GJC3Q8NFK1 279 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 OR52L1Q8NGH7 329 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 GIPC3Q8TF64 312 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 RDH5Q92781 318 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 FEVQ99581 238 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 COQ7Q99807 217 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 TSSK6Q9BXA6 273 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 NMNAT2Q9BZQ4 307 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 HINT3Q9NQE9 182 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms