RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 C12orf73Q69YU5 71 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 DEGS2Q6QHC5 323 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 MRPL21Q7Z2W9 205 aaKnown RBP17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 KLBQ86Z14 1044 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 CCL17Q92583 94 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 ERGIC1Q969X5 290 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 RAB39BQ96DA2 213 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 ZMYND19Q96E35 227 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 OR2V2Q96R30 315 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 TEAD3Q99594 435 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 RBM4BQ9BQ04 359 aaKnown RBP17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 SOX7Q9BT81 388 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 GABARAPL3Q9BY60 117 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 OAZ3Q9UMX2 235 aa17.67■□□□□ 0.42
TRAPPC9-215ENST00000524162 TGFAP01135 160 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 CFL1P23528 166 aaKnown RBP17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 IGFBP5P24593 272 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 HSD11B1P28845 292 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 KLHL12Q53G59 568 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 NXNL2Q5VZ03 156 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 SLC16A9Q7RTY1 509 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 PRSS45Q7RTY3 260 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 PLPP7Q8NBV4 271 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 CIB1Q99828 191 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 RGCCQ9H4X1 137 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 TMEM106BQ9NUM4 274 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 MRPL15Q9P015 296 aaKnown RBP17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 PPP1R3CQ9UQK1 317 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 CACNG2Q9Y698 323 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 TMEM14AQ9Y6G1 99 aa17.66■□□□□ 0.42
TRAPPC9-215ENST00000524162 CD300LBA8K4G0 201 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 H3BNX3 289 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 MLNRO43193 412 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 GMDSO60547 372 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 PTBP3O95758 552 aaKnown RBP17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 ALOX5APP20292 161 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 THBS2P35442 1172 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 PRKXP51817 358 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 ZNF92Q03936 586 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 APOFQ13790 326 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 KPNB1Q14974 876 aaKnown RBP17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 OR5AS1Q8N127 324 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 PYDC1Q8WXC3 89 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 RAB3IPQ96QF0 476 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 MNTQ99583 582 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 GCM1Q9NP62 436 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 HAO2Q9NYQ3 351 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 ZNF391Q9UJN7 358 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 NPTNQ9Y639 398 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 COL6A5A8TX70 2615 aa17.65■□□□□ 0.42
TRAPPC9-215ENST00000524162 ACOD1A6NK06 481 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 SLC22A31A6NKX4 558 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 WNT9BO14905 357 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 PRKYO43930 277 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 MITFO75030 526 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 H2BFMP0C1H6 154 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 FAM157CP0CG43 387 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 EPHA2P29317 976 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 DCTDP32321 178 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 CD200P41217 278 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 CX3CR1P49238 355 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 TMEM155Q4W5P6 130 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 SPRNQ5BIV9 151 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 GLYATL3Q5SZD4 288 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 AADACL4Q5VUY2 407 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 KCTD18Q6PI47 426 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 SPERTQ8NA61 448 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 BBS1Q8NFJ9 593 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 TMEM163Q8TC26 289 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 SPRYD4Q8WW59 207 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 ITLN1Q8WWA0 313 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 MEGF10Q96KG7 1140 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 AMELYQ99218 206 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 SHARPINQ9H0F6 387 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 SEMA6AQ9H2E6 1030 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 USE1Q9NZ43 259 aa17.64■□□□□ 0.41
TRAPPC9-215ENST00000524162 CCDC182A6NF36 153 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 SELENOFO60613 162 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 IGHV2-70P01814 119 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 IGHV2-5P01817 119 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 MSMBP08118 114 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 HNF1AP20823 631 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 RPS7P62081 194 aaKnown RBP17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 ROM1Q03395 351 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 SNCBQ16143 134 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 MEPCEQ7L2J0 689 aaKnown RBP17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 OR51F2Q8NH61 342 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 ASB17Q8WXJ9 295 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 SIGLEC11Q96RL6 698 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 ZNF665Q9H7R5 613 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 LAMP5Q9UJQ1 280 aa17.63■□□□□ 0.41
TRAPPC9-215ENST00000524162 TRAV20A0A0B4J274 112 aa17.62■□□□□ 0.41
TRAPPC9-215ENST00000524162 ZNF254O75437 659 aa17.62■□□□□ 0.41
TRAPPC9-215ENST00000524162 ALPLP05186 524 aa17.62■□□□□ 0.41
TRAPPC9-215ENST00000524162 PSMA6P60900 246 aaKnown RBP17.62■□□□□ 0.41
TRAPPC9-215ENST00000524162 MVKQ03426 396 aa17.62■□□□□ 0.41
TRAPPC9-215ENST00000524162 MZT1Q08AG7 82 aa17.62■□□□□ 0.41
TRAPPC9-215ENST00000524162 TMED1Q13445 227 aa17.62■□□□□ 0.41
TRAPPC9-215ENST00000524162 GLCCI1Q86VQ1 547 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms