RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 FAM212BQ9NTI7 297 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-213ENST00000523488 IL17BQ9UHF5 180 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 A0A087WV62 115 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-213ENST00000523488 M0R143 59 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 CYB5BO43169 146 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 FCMRO60667 390 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 CRTAPO75718 401 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-213ENST00000523488 NGFRP08138 427 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SMIM10L1P0DMW3 83 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 CSNK2A2P19784 350 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-213ENST00000523488 UBE2KP61086 200 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SLC8B1Q6J4K2 584 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SLC22A25Q6T423 547 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 Q6ZVL8 140 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF280BQ86YH2 543 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 OR10AD1Q8NGE0 317 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SMIM10Q96HG1 83 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 DDA1Q9BW61 102 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SLC25A31Q9H0C2 315 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 SLC2A4RGQ9NR83 387 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 MMACHCQ9Y4U1 282 aa7.5□□□□□ -1.21
CSMD1-213ENST00000523488 TRAV8-7A0A075B6U6 113 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 MSGN1A6NI15 193 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 TMEM212A6NML5 194 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 C4orf51C9J302 202 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 STK17BO94768 372 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 C2orf76Q3KRA6 126 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 GFI1BQ5VTD9 330 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 LHX8Q68G74 356 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 TANGO2Q6ICL3 276 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 KIRREL2Q6UWL6 708 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 DPY19L2P2Q6ZN68 376 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF679Q8IYX0 411 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 PCSK9Q8NBP7 692 aaKnown RBP7.49□□□□□ -1.21
CSMD1-213ENST00000523488 RCBTB1Q8NDN9 531 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 NPRL2Q8WTW4 380 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 SOCS4Q8WXH5 440 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 ROBO4Q8WZ75 1007 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 CNRIP1Q96F85 164 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-213ENST00000523488 GAL3ST4Q96RP7 486 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 PRDM7Q9NQW5 492 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 GPR132Q9UNW8 380 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 GPR34Q9UPC5 381 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 MEMO1Q9Y316 297 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 IER3IP1Q9Y5U9 82 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 B4DEV8 164 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 YPEL1O60688 119 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 CDC14BO60729 498 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF354AO60765 605 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-213ENST00000523488 CA11O75493 328 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 GZMBP10144 247 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 NID1P14543 1247 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 TDGF1P3P51864 188 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 ZNF117Q03924 483 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 COL9A2Q14055 689 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-213ENST00000523488 SLC10A1Q14973 349 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 FAM46CQ5VWP2 391 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 TPGS2Q68CL5 300 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 RSPO2Q6UXX9 243 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-213ENST00000523488 GPR137CQ8N3F9 429 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 OR4S1Q8NGB4 309 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 WFIKKN2Q8TEU8 576 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 SLC35A4Q96G79 324 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 THOC3Q96J01 351 aaKnown RBP7.49□□□□□ -1.21
CSMD1-213ENST00000523488 YPEL2Q96QA6 119 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 KCNK15Q9H427 330 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 LUZP4Q9P127 313 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 TAC3Q9UHF0 121 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 FANCMQ8IYD8 2048 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 ASCC3Q8N3C0 2202 aaKnown RBP7.49□□□□□ -1.21
CSMD1-213ENST00000523488 FEZF1A0PJY2 475 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 FITM1A5D6W6 292 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 DUXAA6NLW8 204 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 K7N7A8 449 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 NDUFS4O43181 175 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 CTSVO60911 334 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 GPANK1O95872 356 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 STATHP02808 62 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 POLR2LP62875 67 aaKnown RBP7.49□□□□□ -1.21
CSMD1-213ENST00000523488 DPTQ07507 201 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 SLC9A3R2Q15599 337 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 MOGAT2Q3SYC2 334 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 MFSD12Q6NUT3 480 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 Q6ZSR3 168 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 Q6ZVU0 165 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 LRTM2Q8N967 370 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 CMKLR1Q99788 373 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 OR14J1Q9UGF5 321 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 PLAGL1Q9UM63 463 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 TMED7Q9Y3B3 224 aa7.49□□□□□ -1.21
CSMD1-213ENST00000523488 STRAPQ9Y3F4 350 aaKnown RBP7.49□□□□□ -1.21
CSMD1-213ENST00000523488 KMT2EQ8IZD2 1858 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 IGKV1-8A0A0C4DH67 115 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 HSD17B6O14756 317 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 GCGP01275 180 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 IL2RGP31785 369 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 CCKBRP32239 447 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 OR1D2P34982 312 aa7.48□□□□□ -1.21
CSMD1-213ENST00000523488 ZFP36L1Q07352 338 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms