RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 UQCC2Q9BRT2 126 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZNF416Q9BWM5 594 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 FXYD6Q9H0Q3 95 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ALX4Q9H161 411 aaPredicted RBP9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MOB1AQ9H8S9 216 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MAB21L2Q9Y586 359 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 LOC100509620A0A075B734 347 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 POU3F2P20265 443 aaPredicted RBP9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 H3F3AP84243 136 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 KCNMB1Q16558 191 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SGCAQ16586 387 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 LY6G6FQ5SQ64 297 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 RAET1LQ5VY80 246 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 RAB12Q6IQ22 244 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TMEM81Q6P7N7 255 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 C11orf88Q6PI97 169 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 OPN5Q6U736 354 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 HDDC2Q7Z4H3 204 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 NAA40Q86UY6 237 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CDH26Q8IXH8 852 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MRGPRFQ96AM1 343 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZNF385AQ96PM9 386 aaKnown RBP9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SLC25A21Q9BQT8 299 aaPredicted RBP9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 EDEM2Q9BV94 578 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 UPB1Q9UBR1 384 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 VSIG4Q9Y279 399 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 A0A0A6YYD4 124 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 LOC102725191A0A1B0GVB3 256 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 OR14I1A6ND48 311 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TMEM14DPA8MWL7 114 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 H3BUI4 141 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZIC3O60481 467 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 PMS2P2O95744 297 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 LIFP15018 202 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 OR3A4PP47883 348 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZFP36L1Q07352 338 aaKnown RBP9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZNF468Q5VIY5 522 aaPredicted RBP9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 DTX1Q86Y01 620 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZNF283Q8N7M2 679 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TMEM104Q8NE00 496 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ANGPTL4Q9BY76 406 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SELENOIQ9C0D9 397 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZNF160Q9HCG1 818 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 GLTPQ9NZD2 209 aa9.5□□□□□ -0.89
RAB11FIP1-204ENST00000522774 A0A1W2PP11 408 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 WDPCPO95876 746 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 HLXQ14774 488 aaPredicted RBP9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 EXT1Q16394 746 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 GLIPR1L1Q6UWM5 242 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 COMMD7Q86VX2 200 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZNF101Q8IZC7 436 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MAML2Q8IZL2 1156 aaPredicted RBP9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 C12orf45Q8N5I9 185 aaPredicted RBP9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CCDC107Q8WV48 283 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 C1orf147Q96MC9 270 aaPredicted RBP9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 IER2Q9BTL4 223 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZNF230Q9UIE0 474 aaPredicted RBP9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZNF107Q9UII5 783 aaPredicted RBP9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 OR6C65A6NJZ3 312 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 C9J4A7 227 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 YKT6O15498 198 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SSX5O60225 188 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SSR4P51571 173 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CAPZA1P52907 286 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SORDQ00796 357 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MC2RQ01718 297 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 DHRS2Q13268 280 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 RNASE10Q5GAN6 216 aaKnown RBP9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 C3P1Q6ZMU1 363 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TMUB2Q71RG4 321 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 RHOUQ7L0Q8 258 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 OR2Y1Q8NGV0 311 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 PAQR8Q8TEZ7 354 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 GUCD1Q96NT3 240 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 LPAR5Q9H1C0 372 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SH2D2AQ9NP31 389 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MRPS28Q9Y2Q9 187 aaKnown RBP9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 KCNK7Q9Y2U2 307 aa9.49□□□□□ -0.89
RAB11FIP1-204ENST00000522774 A0A087WZY1 265 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 HMSDA8MTL9 139 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 S100A11P31949 105 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CSNK1A1P48729 337 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CXADRP78310 365 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CAMK2BQ13554 666 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MPPED2Q15777 294 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 RSPO4Q2I0M5 234 aaPredicted RBP9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TRIM61Q5EBN2 209 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 STEAP2Q8NFT2 490 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 OR10R2Q8NGX6 335 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 M1APQ8TC57 530 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 GSX2Q9BZM3 304 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SMOC1Q9H4F8 434 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 BANF2Q9H503 90 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 IGKV1-9A0A0C4DH69 117 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 OR5H15A6NDH6 313 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 C19orf67A6NJJ6 358 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TLX3O43711 291 aaPredicted RBP9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MPIG6BO95866 241 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CD63P08962 238 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 PPP3CBP16298 524 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms