RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 TWF1Q12792 350 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 PRPSAP1Q14558 356 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 TAF1AQ15573 450 aaPredicted RBP3.22□□□□□ -1.89
SKP1-209ENST00000522552 SLC9A3R2Q15599 337 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 TMEM176BQ3YBM2 270 aaPredicted RBP3.22□□□□□ -1.89
SKP1-209ENST00000522552 SPIN4Q56A73 249 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 SPIN3Q5JUX0 258 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 HACD4Q5VWC8 232 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 Q6ZRP5 223 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 Q6ZVH6 145 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 ZNF575Q86XF7 245 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 SPICQ8N5J4 248 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 OR6Q1Q8NGQ2 317 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 CHCHD10Q8WYQ3 142 aaPredicted RBP3.22□□□□□ -1.89
SKP1-209ENST00000522552 NTAN1Q96AB6 310 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 TESCQ96BS2 214 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 TLCD1Q96CP7 247 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 ZMYND19Q96E35 227 aaPredicted RBP3.22□□□□□ -1.89
SKP1-209ENST00000522552 ZNF599Q96NL3 588 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 TMEM208Q9BTX3 173 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 PRORYQ9H606 182 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 SH2D2AQ9NP31 389 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 ABCB9Q9NP78 766 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 CALYQ9NYX4 217 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 ST3GAL6Q9Y274 331 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 V9GY05 133 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 ROCK1Q13464 1354 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 NUP153P49790 1475 aaKnown RBP3.22□□□□□ -1.89
SKP1-209ENST00000522552 LRRK1Q38SD2 2015 aa3.22□□□□□ -1.89
SKP1-209ENST00000522552 FHAD1B1AJZ9 1412 aa3.21□□□□□ -1.89
SKP1-209ENST00000522552 FAM240AA0A1B0GVK7 77 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 FABP7O15540 132 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 SSNA1O43805 119 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 CLDN1O95832 211 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 FSHBP01225 129 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 IFNA16P05015 189 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 BCHEP06276 602 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 CTSLP07711 333 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 HCKP08631 526 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 H2AFZP0C0S5 128 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 CCDC166P0CW27 439 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 CD37P11049 281 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 FUT3P21217 361 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 RPS12P25398 132 aaKnown RBP3.21□□□□□ -1.9
SKP1-209ENST00000522552 PSMA1P25786 263 aaKnown RBP3.21□□□□□ -1.9
SKP1-209ENST00000522552 NTSP30990 170 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 RPA3P35244 121 aaPredicted RBP3.21□□□□□ -1.9
SKP1-209ENST00000522552 SPRP35270 261 aaPredicted RBP3.21□□□□□ -1.9
SKP1-209ENST00000522552 KLK7P49862 253 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 PSMD7P51665 324 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 RND2P52198 227 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 DLX6P56179 175 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 OR12D2P58182 307 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 S100A12P80511 92 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 MXD1Q05195 221 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 OR2T5Q6IEZ7 315 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 LRRN1Q6UXK5 716 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 NPSR1Q6W5P4 371 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 FOXL2NBQ6ZUU3 175 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 TMEM179Q6ZVK1 233 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 ZNF571Q7Z3V5 609 aaPredicted RBP3.21□□□□□ -1.9
SKP1-209ENST00000522552 NT5DC3Q86UY8 548 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 P2RY8Q86VZ1 359 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 RAB43Q86YS6 212 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 C9orf40Q8IXQ3 194 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 FAM71AQ8IYT1 594 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 CIARTQ8N365 385 aaPredicted RBP3.21□□□□□ -1.9
SKP1-209ENST00000522552 NRACQ8N912 160 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 OR1M1Q8NGA1 313 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 OR52E2Q8NGJ4 325 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 OR2T29Q8NH02 315 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 NEK7Q8TDX7 302 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 RAB8BQ92930 207 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 FGGYQ96C11 551 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 RBP7Q96R05 134 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 ZNF747Q9BV97 191 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 UBXN6Q9BZV1 441 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 CLMPQ9H6B4 373 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 METTL17Q9H7H0 456 aaPredicted RBP3.21□□□□□ -1.9
SKP1-209ENST00000522552 EXD2Q9NVH0 621 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 GID8Q9NWU2 228 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 TAS2R7Q9NYW3 318 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 DOCK7Q96N67 2140 aa3.21□□□□□ -1.9
SKP1-209ENST00000522552 IGHV2OR16-5A0A0B4J2B6 119 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 IGKV1D-13A0A0B4J2D9 117 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 DNAJC9-AS1A6NH13 148 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 A6NIZ1 184 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 H7C1H1 209 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 TNFRSF11BO00300 401 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 SLC17A2O00624 439 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 GLSO94925 669 aaPredicted RBP3.2□□□□□ -1.9
SKP1-209ENST00000522552 AIFM1O95831 613 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 IGKV1-13P0DP09 117 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 F8A1P23610 371 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 OMPP47874 163 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 CYB561P49447 251 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 INHBCP55103 352 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 OR4D2P58180 307 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 RAP1BP61224 184 aa3.2□□□□□ -1.9
SKP1-209ENST00000522552 NUTF2P61970 127 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms