RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 LCATP04180 440 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 H2BFMP0C1H6 154 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 EPHA2P29317 976 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 MAGEB1P43366 347 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 CX3CR1P49238 355 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 ACTC1P68032 377 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 ACTA1P68133 377 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 TAF13Q15543 124 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 TMEM249Q2WGJ8 235 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 GLYATL3Q5SZD4 288 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 FDX2Q6P4F2 183 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 LYPD4Q6UWN0 246 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 CLEC9AQ6UXN8 241 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 OR51L1Q8NGJ5 315 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 Q96MT0 163 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 TLNRD1Q9H1K6 362 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 SAP30LQ9HAJ7 183 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 INPP5EQ9NRR6 644 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 TMEM100Q9NV29 134 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 FAM206AQ9NX38 181 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 LAMP5Q9UJQ1 280 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 CSMD1Q96PZ7 3565 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 PPIAL4EA0A075B759 164 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 PPIAL4CA0A0B4J2A2 164 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 ZNF670-ZNF695F2Z2N8 137 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 PPIAL4DF5H284 164 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 F5H5K5 113 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 PPIAL4FP0DN26 164 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 IGHV4-31P0DP07 118 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 HSD11B1P28845 292 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 MRPL28Q13084 256 aaKnown RBP8.02□□□□□ -1.13
CLK4-209ENST00000521621 ZNF829Q3KNS6 432 aaPredicted RBP8.02□□□□□ -1.13
CLK4-209ENST00000521621 PGAP1Q75T13 922 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 ICA1LQ8NDH6 482 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 SLC7A6Q92536 515 aa8.02□□□□□ -1.13
CLK4-209ENST00000521621 ZNF275Q9NSD4 429 aaPredicted RBP8.02□□□□□ -1.13
CLK4-209ENST00000521621 NUFIP1Q9UHK0 495 aaKnown RBP8.02□□□□□ -1.13
CLK4-209ENST00000521621 CLDN25C9JDP6 229 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 LILRA1O75019 489 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 ANPEPP15144 967 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 CCL1P22362 96 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 COL8A2P25067 703 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 CFHR2P36980 270 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 TNFAIP6P98066 277 aaPredicted RBP8.01□□□□□ -1.13
CLK4-209ENST00000521621 HFEQ30201 348 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 SNAI3Q3KNW1 292 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 OGFRL1Q5TC84 451 aaPredicted RBP8.01□□□□□ -1.13
CLK4-209ENST00000521621 ZBTB49Q6ZSB9 765 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 MRPL21Q7Z2W9 205 aaKnown RBP8.01□□□□□ -1.13
CLK4-209ENST00000521621 SLC35F2Q8IXU6 374 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 RHOXF1Q8NHV9 184 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 SGK3Q96BR1 496 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 IL4I1Q96RQ9 567 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 AMELYQ99218 206 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 RIBC2Q9H4K1 309 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 TRIM36Q9NQ86 728 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 FZR1Q9UM11 496 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 LRP12Q9Y561 859 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 MYO9AB2RTY4 2548 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 CD300LBA8K4G0 201 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 F5H0A9 414 aaPredicted RBP8.01□□□□□ -1.13
CLK4-209ENST00000521621 H0YAE9 185 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 DLGAP1O14490 977 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 GPR6P46095 362 aaPredicted RBP8.01□□□□□ -1.13
CLK4-209ENST00000521621 FAM3AP98173 230 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 ZNF92Q03936 586 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 KLHL12Q53G59 568 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 SPATA46Q5T0L3 261 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 RAB1CQ92928 201 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 EME1Q96AY2 570 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 TIMD4Q96H15 378 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 MEGF10Q96KG7 1140 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 MROQ9BYG7 248 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 TPK1Q9H3S4 243 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 DCLRE1BQ9H816 532 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 FAM118AQ9NWS6 357 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 SMPD3Q9NY59 655 aaPredicted RBP8.01□□□□□ -1.13
CLK4-209ENST00000521621 KLHDC2Q9Y2U9 406 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 MPC1Q9Y5U8 109 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 ALPK2Q86TB3 2170 aa8.01□□□□□ -1.13
CLK4-209ENST00000521621 YLPM1P49750 1951 aaKnown RBP8.01□□□□□ -1.13
CLK4-209ENST00000521621 CADP27708 2225 aa8□□□□□ -1.13
CLK4-209ENST00000521621 IRGMA1A4Y4 181 aa8□□□□□ -1.13
CLK4-209ENST00000521621 MLNRO43193 412 aa8□□□□□ -1.13
CLK4-209ENST00000521621 IGHV2-70P01814 119 aa8□□□□□ -1.13
CLK4-209ENST00000521621 PCMT1P22061 227 aa8□□□□□ -1.13
CLK4-209ENST00000521621 ERFP50548 548 aa8□□□□□ -1.13
CLK4-209ENST00000521621 DVL1P1P54792 670 aaPredicted RBP8□□□□□ -1.13
CLK4-209ENST00000521621 CDH15P55291 814 aa8□□□□□ -1.13
CLK4-209ENST00000521621 ZNF121P58317 390 aaPredicted RBP8□□□□□ -1.13
CLK4-209ENST00000521621 ALKBH6Q3KRA9 238 aa8□□□□□ -1.13
CLK4-209ENST00000521621 HIST2H2ABQ8IUE6 130 aaPredicted RBP8□□□□□ -1.13
CLK4-209ENST00000521621 MUC20Q8N307 709 aaPredicted RBP8□□□□□ -1.13
CLK4-209ENST00000521621 FTMTQ8N4E7 242 aa8□□□□□ -1.13
CLK4-209ENST00000521621 TEX29Q8N6K0 151 aa8□□□□□ -1.13
CLK4-209ENST00000521621 FBLIM1Q8WUP2 373 aa8□□□□□ -1.13
CLK4-209ENST00000521621 C10orf35Q96D05 121 aa8□□□□□ -1.13
CLK4-209ENST00000521621 SIGLEC11Q96RL6 698 aa8□□□□□ -1.13
CLK4-209ENST00000521621 SLC29A1Q99808 456 aa8□□□□□ -1.13
CLK4-209ENST00000521621 BPESC1Q9GZL8 116 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms