RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 SERINC1Q9NRX5 453 aa3.34□□□□□ -1.87
CLK4-207ENST00000520909 UBAP1Q9NZ09 502 aa3.34□□□□□ -1.87
CLK4-207ENST00000520909 CHRNA9Q9UGM1 479 aa3.34□□□□□ -1.87
CLK4-207ENST00000520909 IL20RAQ9UHF4 553 aa3.34□□□□□ -1.87
CLK4-207ENST00000520909 DKKL1Q9UK85 242 aa3.34□□□□□ -1.87
CLK4-207ENST00000520909 BOKQ9UMX3 212 aaPredicted RBP3.34□□□□□ -1.87
CLK4-207ENST00000520909 RPH3AQ9Y2J0 694 aaPredicted RBP3.34□□□□□ -1.87
CLK4-207ENST00000520909 ZNF337Q9Y3M9 751 aa3.34□□□□□ -1.87
CLK4-207ENST00000520909 CDH10Q9Y6N8 788 aa3.34□□□□□ -1.87
CLK4-207ENST00000520909 HEATR5AQ86XA9 2040 aa3.34□□□□□ -1.88
CLK4-207ENST00000520909 IGF2RP11717 2491 aa3.34□□□□□ -1.88
CLK4-207ENST00000520909 FRYQ5TBA9 3013 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 DOCK10Q96BY6 2186 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 PRRC2CQ9Y520 2896 aaKnown RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 CELSR3Q9NYQ7 3312 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 DCHS1Q96JQ0 3298 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 DMXL2Q8TDJ6 3036 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 ANKRD11Q6UB99 2663 aaPredicted RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 TRAV27A0A087WT01 109 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 TEX13DA0A0J9YY54 714 aaPredicted RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 HTR3EA5X5Y0 456 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 PINLYPA6NC86 204 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 A6NLC8 198 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 FAM166BA8MTA8 275 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 EFNA2O43921 213 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 NME2P1O60361 137 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 PTP4A3O75365 173 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 OR6A2O95222 327 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 AHSA1O95433 338 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 IGF2P01344 180 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 BGLAPP02818 100 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 HMGN1P05114 100 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 LYNP07948 512 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 IL11P20809 199 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 EEF1B2P24534 225 aaKnown RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 GDF1P27539 372 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 ELK4P28324 431 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 SRD5A2P31213 254 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 FMO3P31513 532 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 SLC6A6P31641 620 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 SFTPDP35247 375 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 RPL4P36578 427 aaKnown RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 RFC3P40938 356 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 AQP2P41181 271 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 EIF1P41567 113 aaKnown RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 RPS5P46782 204 aaKnown RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 SLC9A3P48764 834 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 SMSP52788 366 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 DSCR4P56555 118 aaPredicted RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 NUP107P57740 925 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 OR2B6P58173 313 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 CD81P60033 236 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 PPIAP62937 165 aaKnown RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 CDK5Q00535 292 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 MYBPC1Q00872 1141 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 PLGLB1Q02325 96 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 CD47Q08722 323 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 PMS2P3Q13401 168 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 IL18R1Q13478 541 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 SNAPC1Q16533 368 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 ZNF74Q16587 644 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 PNLIPRP3Q17RR3 467 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 PGGHGQ32M88 737 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 TMEM176BQ3YBM2 270 aaPredicted RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 SLC25A53Q5H9E4 307 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 RAET1LQ5VY80 246 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 SLX4IPQ5VYV7 408 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 C12orf73Q69YU5 71 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 ACSM5Q6NUN0 579 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 SLC27A4Q6P1M0 643 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 INO80CQ6PI98 192 aaPredicted RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 SMARCD3Q6STE5 483 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 ZNF620Q6ZNG0 422 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 NANOGNBQ7Z5D8 188 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 CCDC71Q8IV32 467 aaPredicted RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 ENTHD1Q8IYW4 607 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 GTPBP8Q8N3Z3 284 aaPredicted RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 CLDN22Q8N7P3 220 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 TCEANCQ8N8B7 351 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 MDS2Q8NDY4 140 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 FAM83FQ8NEG4 500 aaPredicted RBP3.33□□□□□ -1.88
CLK4-207ENST00000520909 BPIFB6Q8NFQ5 453 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 OR2T33Q8NG76 320 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 OR52L1Q8NGH7 329 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 OR8D4Q8NGM9 314 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 OR4Q3Q8NH05 313 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 MOSPD2Q8NHP6 518 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 RHOXF1Q8NHV9 184 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 CNIH3Q8TBE1 160 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 ZPLD1Q8TCW7 415 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 ST8SIA4Q92187 359 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 HAS2Q92819 552 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 NTNG2Q96CW9 530 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 DDIT4LQ96D03 193 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 DTNBP1Q96EV8 351 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 PLEKHA8Q96JA3 519 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 SLC38A2Q96QD8 506 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 OR5B2Q96R09 309 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 TEX12Q9BXU0 123 aa3.33□□□□□ -1.88
CLK4-207ENST00000520909 POTEKPQ9BYX7 375 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms