RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	FABP3	P05413	133 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	PCK1	P35558	622 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	CEACAM6	P40199	344 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	HAAO	P46952	286 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	NDUFA8	P51970	172 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	AQP5	P55064	265 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	RAB31	Q13636	194 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	LRRC10	Q5BKY1	277 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	MARC1	Q5VT66	337 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	FAM19A1	Q7Z5A9	133 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	TMEM25	Q86YD3	366 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	OR1N2	Q8NGR9	330 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	OR2G3	Q8NGZ4	309 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	OR6X1	Q8NH79	312 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	OR2AE1	Q8NHA4	323 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	MRAP	Q8TCY5	172 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	ZFP90	Q8TF47	636 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	GPR21	Q99679	349 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	NICN1	Q9BSH3	213 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	POTEKP	Q9BYX7	375 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	PORCN	Q9H237	461 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	SAV1	Q9H4B6	383 aa	Predicted RBP	2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	C6orf50	Q9HD87	102 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	TRMT112	Q9UI30	125 aa	Known RBP	2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	FADS3	Q9Y5Q0	445 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	PCDH11X	Q9BZA7	1347 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	MAPK8IP3	Q9UPT6	1336 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	GAPVD1	Q14C86	1478 aa		2.7	□□□□□ -1.98
SREK1-208	ENST00000520580	FAM240A	A0A1B0GVK7	77 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580		A0A1W2PPR1	153 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	IGHV3-23	P01764	117 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	LOX	P28300	417 aa	Predicted RBP	2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	RGS6	P49758	472 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	EMP2	P54851	167 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	PPP1CB	P62140	327 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	RPS23	P62266	143 aa	Known RBP	2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	SLC35A1	P78382	337 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	MRPS15	P82914	257 aa	Known RBP	2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	POM121L12	Q8N7R1	296 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	ZNF738	Q8NE65	137 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	ATP6V1C2	Q8NEY4	427 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	OR8G5	Q8NG78	346 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	OR2Y1	Q8NGV0	311 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	UCN3	Q969E3	161 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	ZNF689	Q96CS4	500 aa	Predicted RBP	2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	ZDHHC11	Q9H8X9	412 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	WDR54	Q9H977	334 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	ZDHHC4	Q9NPG8	344 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	RHBDL2	Q9NX52	303 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	SNX24	Q9Y343	169 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	KCNE3	Q9Y6H6	103 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	TCF20	Q9UGU0	1960 aa	Known RBP	2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	NFASC	O94856	1347 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	TRAV39	A0A0B4J263	110 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	RAD51B	O15315	384 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	SHOX2	O60902	331 aa	Predicted RBP	2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	MYO1D	O94832	1006 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	KLF8	O95600	359 aa	Predicted RBP	2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	GFAP	P14136	432 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	ZP3	P21754	424 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	TUFM	P49411	452 aa	Known RBP	2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	TSPAN5	P62079	268 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	IL5RA	Q01344	420 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	PON2	Q15165	354 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	TRAM1	Q15629	374 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	POU2AF1	Q16633	256 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	BSX	Q3C1V8	233 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	C14orf177	Q52M58	125 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	THOC7	Q6I9Y2	204 aa	Known RBP	2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	CLEC18B	Q6UXF7	455 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	FAM151B	Q6UXP7	276 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	TEX43	Q6ZNM6	134 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	CA13	Q8N1Q1	262 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	NPW	Q8N729	165 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	OR10W1	Q8NGF6	305 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	LRRC58	Q96CX6	371 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	AURKB	Q96GD4	344 aa	Predicted RBP	2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	PLEKHF1	Q96S99	279 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	PSMB7	Q99436	277 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	RASL11B	Q9BPW5	248 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	DEFB126	Q9BYW3	111 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	ZNF442	Q9H7R0	627 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	RGS18	Q9NS28	235 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	C1orf109	Q9NX04	203 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	HMGXB4	Q9UGU5	601 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	KIF13A	Q9H1H9	1805 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	FHOD3	Q2V2M9	1422 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580	POGZ	Q7Z3K3	1410 aa		2.69	□□□□□ -1.98
SREK1-208	ENST00000520580		A0A0J9YWU9	116 aa		2.68	□□□□□ -1.98
SREK1-208	ENST00000520580	LIN7A	O14910	233 aa	Predicted RBP	2.68	□□□□□ -1.98
SREK1-208	ENST00000520580	CTNS	O60931	367 aa		2.68	□□□□□ -1.98
SREK1-208	ENST00000520580	SUPT7L	O94864	414 aa		2.68	□□□□□ -1.98
SREK1-208	ENST00000520580	ZNF30	P17039	623 aa		2.68	□□□□□ -1.98
SREK1-208	ENST00000520580	ATF6	P18850	670 aa		2.68	□□□□□ -1.98
SREK1-208	ENST00000520580	P2RY4	P51582	365 aa		2.68	□□□□□ -1.98
SREK1-208	ENST00000520580	TAS2R46	P59540	309 aa		2.68	□□□□□ -1.98
SREK1-208	ENST00000520580	PITPNA	Q00169	270 aa		2.68	□□□□□ -1.98
SREK1-208	ENST00000520580	RPL18A	Q02543	176 aa	Known RBP	2.68	□□□□□ -1.98
SREK1-208	ENST00000520580	FLOT2	Q14254	428 aa		2.68	□□□□□ -1.98
SREK1-208	ENST00000520580	PRPSAP1	Q14558	356 aa		2.68	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms