RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	SMIM10L2A	P0DMW4	78 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	SMIM10L2B	P0DMW5	78 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	MCF2	P10911	925 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	U2AF2	P26368	475 aa	Known RBP eCLIP	2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	GDI1	P31150	447 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	SERPINB5	P36952	375 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	RPS9	P46781	194 aa	Known RBP	2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	CCNH	P51946	323 aa	Predicted RBP	2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	MNAT1	P51948	309 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	NUTF2	P61970	127 aa	Known RBP	2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	HMGCS1	Q01581	520 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	SMARCB1	Q12824	385 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	GGTLC2	Q14390	218 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	ZSCAN26	Q16670	478 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	KCTD19	Q17RG1	926 aa	Predicted RBP	2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	TFDP3	Q5H9I0	405 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	SOHLH1	Q5JUK2	328 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	CNPY4	Q8N129	248 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	METTL13	Q8N6R0	699 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	TMEM105	Q8N8V8	129 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	PPTC7	Q8NI37	304 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	DNAJB3	Q8WWF6	145 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	MBOAT7	Q96N66	472 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	MYCBP	Q99417	103 aa	Predicted RBP	2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	SLC29A1	Q99808	456 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	LXN	Q9BS40	222 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	NUP58	Q9BVL2	599 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	OSBPL10	Q9BXB5	764 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	LCE3D	Q9BYE3	92 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	BRWD1	Q9NSI6	2320 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	DDX19A	Q9NUU7	478 aa	Known RBP	2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	SLC2A8	Q9NY64	477 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	PRO0461	Q9UI25	63 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	PSG11	Q9UQ72	335 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	ST3GAL6	Q9Y274	331 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400		Q9Y3F1	56 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	ATG2B	Q96BY7	2078 aa		2.72	□□□□□ -1.97
CTNNA1-222	ENST00000520400	IGSF9B	Q9UPX0	1349 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	MYO16	Q9Y6X6	1858 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	C2orf16	Q68DN1	1984 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	IGLV4-69	A0A075B6H9	119 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	ZNF816-ZNF321P	A0A0X1KG74	233 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400		A0A1B0GVX0	72 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	FAM47DP	A6NHR8	397 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400		H3BNH8	94 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	RAB29	O14966	203 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	MRPS12	O15235	138 aa	Known RBP	2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	AIFM1	O95831	613 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	ANXA5	P08758	320 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	SMIM10L1	P0DMW3	83 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	ADRB3	P13945	408 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	OMG	P23515	440 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	CASP1	P29466	404 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	KRTAP10-8	P60410	259 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	PSMC5	P62195	406 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	SLC25A11	Q02978	314 aa	Known RBP	2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	SIGLEC14	Q08ET2	396 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	EIF4EBP2	Q13542	120 aa	Predicted RBP	2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	ARHGAP19	Q14CB8	494 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	POU2AF1	Q16633	256 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	FAM83E	Q2M2I3	478 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	DEFB116	Q30KQ4	102 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	ANKRD26P1	Q6NSI1	321 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	ZNF493	Q6ZR52	646 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	STRADA	Q7RTN6	431 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	TAS2R42	Q7RTR8	314 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	TMCO2	Q7Z6W1	182 aa	Predicted RBP	2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	PCP2	Q8IVA1	136 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	EID2	Q8N6I1	236 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	FAM86B1	Q8N7N1	296 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	CEP112	Q8N8E3	955 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	OR10G2	Q8NGC3	310 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	OR10R2	Q8NGX6	335 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	OR5B3	Q8NH48	314 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	ERMN	Q8TAM6	284 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	ACMSD	Q8TDX5	336 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	ELMO1	Q92556	727 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	SMIM10	Q96HG1	83 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	TSSK3	Q96PN8	268 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	KCTD14	Q9BQ13	255 aa	Predicted RBP	2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	SLC17A9	Q9BYT1	436 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	PATZ1	Q9HBE1	687 aa	Known RBP	2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	TM9SF3	Q9HD45	589 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	NRBP2	Q9NSY0	501 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	CHMP5	Q9NZZ3	219 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	RAB26	Q9ULW5	256 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	ING4	Q9UNL4	249 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	MYOF	Q9NZM1	2061 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	DENND4C	Q5VZ89	1909 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	CELSR3	Q9NYQ7	3312 aa		2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	TLN1	Q9Y490	2541 aa	Known RBP	2.71	□□□□□ -1.98
CTNNA1-222	ENST00000520400	ZFHX3	Q15911	3703 aa		2.7	□□□□□ -1.98
CTNNA1-222	ENST00000520400	MROH7	Q68CQ1	1323 aa		2.7	□□□□□ -1.98
CTNNA1-222	ENST00000520400	MIA3	Q5JRA6	1907 aa		2.7	□□□□□ -1.98
CTNNA1-222	ENST00000520400	IGLV11-55	A0A075B6I3	123 aa		2.7	□□□□□ -1.98
CTNNA1-222	ENST00000520400	IGKV6D-21	A0A0A0MT36	114 aa		2.7	□□□□□ -1.98
CTNNA1-222	ENST00000520400	HEATR9	A2RTY3	570 aa		2.7	□□□□□ -1.98

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