RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 GIPP09681 153 aaPredicted RBP22.7■■□□□ 1.22
COL13A1-213ENST00000520267 NR2C1P13056 603 aa22.7■■□□□ 1.22
COL13A1-213ENST00000520267 UBE2MP61081 183 aaKnown RBP22.7■■□□□ 1.22
COL13A1-213ENST00000520267 GRB2P62993 217 aaKnown RBP22.7■■□□□ 1.22
COL13A1-213ENST00000520267 ENDOGQ14249 297 aaKnown RBP22.7■■□□□ 1.22
COL13A1-213ENST00000520267 C2orf68Q2NKX9 166 aa22.7■■□□□ 1.22
COL13A1-213ENST00000520267 TEX261Q6UWH6 196 aa22.7■■□□□ 1.22
COL13A1-213ENST00000520267 NAA40Q86UY6 237 aa22.7■■□□□ 1.22
COL13A1-213ENST00000520267 FTMTQ8N4E7 242 aa22.7■■□□□ 1.22
COL13A1-213ENST00000520267 DTWD2Q8NBA8 298 aa22.7■■□□□ 1.22
COL13A1-213ENST00000520267 SGCZQ96LD1 299 aa22.7■■□□□ 1.22
COL13A1-213ENST00000520267 NECAB3Q96P71 396 aaPredicted RBP22.7■■□□□ 1.22
COL13A1-213ENST00000520267 NELFAQ9H3P2 528 aa22.7■■□□□ 1.22
COL13A1-213ENST00000520267 U3KQ87 197 aa22.7■■□□□ 1.22
COL13A1-213ENST00000520267 ITGB2P05107 769 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 ZNF133P52736 654 aaPredicted RBP22.69■■□□□ 1.22
COL13A1-213ENST00000520267 B3GALT5-AS1P59052 145 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 CHAF1BQ13112 559 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 AWAT2Q6E213 333 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 RAB12Q6IQ22 244 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 C6orf15Q6UXA7 325 aaPredicted RBP22.69■■□□□ 1.22
COL13A1-213ENST00000520267 YRDCQ86U90 279 aaKnown RBP22.69■■□□□ 1.22
COL13A1-213ENST00000520267 MUC20Q8N307 709 aaPredicted RBP22.69■■□□□ 1.22
COL13A1-213ENST00000520267 ZIC4Q8N9L1 334 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 NABP1Q96AH0 204 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 UBE2QL1A1L167 161 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 OR2A4O95047 310 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 CYB5AP00167 134 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 ZNF735P0CB33 412 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 CCL1P22362 96 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 MPLP40238 635 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 TSPAN5P62079 268 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 CHST4Q8NCG5 386 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 SLC39A7Q92504 469 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 OR2A7Q96R45 310 aa22.69■■□□□ 1.22
COL13A1-213ENST00000520267 P04436 131 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 AMY2AP04746 511 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 ERCC1P07992 297 aaPredicted RBP22.68■■□□□ 1.22
COL13A1-213ENST00000520267 GUCA1AP43080 201 aaPredicted RBP22.68■■□□□ 1.22
COL13A1-213ENST00000520267 IDO2Q6ZQW0 420 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 FOXL2NBQ6ZUU3 175 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 FJX1Q86VR8 437 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 LRRC18Q8N456 261 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 OR4S1Q8NGB4 309 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 OR5H15A6NDH6 313 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 ZNF736B4DX44 427 aaPredicted RBP22.68■■□□□ 1.22
COL13A1-213ENST00000520267 DHHO43323 396 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 CD74P04233 296 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 CDNFQ49AH0 187 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 CHMP1BQ7LBR1 199 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 CDH26Q8IXH8 852 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 ZNF680Q8NEM1 530 aa22.68■■□□□ 1.22
COL13A1-213ENST00000520267 RBM24Q9BX46 236 aaKnown RBP22.68■■□□□ 1.22
COL13A1-213ENST00000520267 TMEM14DPA8MWL7 114 aa22.67■■□□□ 1.22
COL13A1-213ENST00000520267 SIX6O95475 246 aa22.67■■□□□ 1.22
COL13A1-213ENST00000520267 MELTFP08582 738 aa22.67■■□□□ 1.22
COL13A1-213ENST00000520267 CTSSP25774 331 aa22.67■■□□□ 1.22
COL13A1-213ENST00000520267 DOK3Q7L591 496 aa22.67■■□□□ 1.22
COL13A1-213ENST00000520267 RTN4RL2Q86UN3 420 aa22.67■■□□□ 1.22
COL13A1-213ENST00000520267 UXS1Q8NBZ7 420 aa22.67■■□□□ 1.22
COL13A1-213ENST00000520267 ZNF775Q96BV0 537 aaPredicted RBP22.67■■□□□ 1.22
COL13A1-213ENST00000520267 DPCDQ9BVM2 203 aaPredicted RBP22.67■■□□□ 1.22
COL13A1-213ENST00000520267 POFUT1Q9H488 388 aa22.67■■□□□ 1.22
COL13A1-213ENST00000520267 FOXD3Q9UJU5 478 aaPredicted RBP22.67■■□□□ 1.22
COL13A1-213ENST00000520267 SMAD9O15198 467 aaKnown RBP22.66■■□□□ 1.22
COL13A1-213ENST00000520267 ICAM2P13598 275 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 RAP2BP61225 183 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 PGAP1Q75T13 922 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 TRAPPC6BQ86SZ2 158 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 ZNF584Q8IVC4 421 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 GJC3Q8NFK1 279 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 OR14K1Q8NGZ2 314 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 ZNF107Q9UII5 783 aaPredicted RBP22.66■■□□□ 1.22
COL13A1-213ENST00000520267 FARSAQ9Y285 508 aaKnown RBP22.66■■□□□ 1.22
COL13A1-213ENST00000520267 MPC2O95563 127 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 HPP00738 406 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 SRD5A2P31213 254 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 GNG2P59768 71 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 RAB11FIP2Q7L804 512 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 ZNF101Q8IZC7 436 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 BEST3Q8N1M1 668 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 BPIFB2Q8N4F0 458 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 ESX1Q8N693 406 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 OR2AK2Q8NG84 335 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 ZNF837Q96EG3 531 aaPredicted RBP22.66■■□□□ 1.22
COL13A1-213ENST00000520267 PGAM5Q96HS1 289 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 RADILQ96JH8 1075 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 LYZL4Q96KX0 146 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 SLC6A7Q99884 636 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 NICN1Q9BSH3 213 aa22.66■■□□□ 1.22
COL13A1-213ENST00000520267 RFPL3SP0C7P2 107 aa22.65■■□□□ 1.22
COL13A1-213ENST00000520267 ZNF883P0CG24 379 aa22.65■■□□□ 1.22
COL13A1-213ENST00000520267 OR3A4PP47883 348 aa22.65■■□□□ 1.22
COL13A1-213ENST00000520267 SSPNQ14714 243 aa22.65■■□□□ 1.22
COL13A1-213ENST00000520267 C4orf46Q504U0 113 aa22.65■■□□□ 1.22
COL13A1-213ENST00000520267 GLIPR1L1Q6UWM5 242 aa22.65■■□□□ 1.22
COL13A1-213ENST00000520267 GVQW1Q8N7I0 195 aa22.65■■□□□ 1.22
COL13A1-213ENST00000520267 OR14L1PQ8NHC6 308 aa22.65■■□□□ 1.22
COL13A1-213ENST00000520267 NUDCD2Q8WVJ2 157 aa22.65■■□□□ 1.22
COL13A1-213ENST00000520267 FBLN5Q9UBX5 448 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms