RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 MFSD8Q8NHS3 518 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 FGFBP3Q8TAT2 258 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 LZICQ8WZA0 190 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 APH1AQ96BI3 265 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 SLC25A36Q96CQ1 311 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 TPD52L3Q96J77 140 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 LURAP1Q96LR2 239 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 KCTD14Q9BQ13 255 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-208ENST00000520228 ZNF226Q9NYT6 803 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 ADA2Q9NZK5 511 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 C6orf203Q9P0P8 240 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-208ENST00000520228 NOSIPQ9Y314 301 aaKnown RBP5.91□□□□□ -1.46
SDCBP-208ENST00000520228 POLQO75417 2590 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 FBN2P35556 2912 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 NCOA6Q14686 2063 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-208ENST00000520228 FTCDNL1E5RQL4 147 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 CHP2O43745 196 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 SHOX2O60902 331 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-208ENST00000520228 GMNNO75496 209 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 VAMP5O95183 116 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 IGHV3-9P01782 118 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 PSMB1P20618 241 aaKnown RBP5.9□□□□□ -1.46
SDCBP-208ENST00000520228 IL32P24001 234 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 EDNRAP25101 427 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 SLC6A6P31641 620 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 OR1E2P47887 323 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 SLC9A3P48764 834 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 P2RY4P51582 365 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 KRTAP10-9P60411 292 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 SELENOWP63302 87 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 FBXW9Q5XUX1 488 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 CASP12Q6UXS9 341 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 RBPMS2Q6ZRY4 209 aaKnown RBP5.9□□□□□ -1.46
SDCBP-208ENST00000520228 AAED1Q7RTV5 226 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 GABRG1Q8N1C3 465 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 CCDC197Q8NCU1 140 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 STEAP2Q8NFT2 490 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 OR9K2Q8NGE7 335 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 OR6S1Q8NH40 331 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 ADAMTS16Q8TE57 1224 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 HSD17B8Q92506 261 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 SLAMF9Q96A28 289 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 TMEM43Q9BTV4 400 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 ACTR6Q9GZN1 396 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 OR10A4Q9H209 315 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 OPA3Q9H6K4 179 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 NDE1Q9NXR1 346 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 ABCD2Q9UBJ2 740 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 SLC7A7Q9UM01 511 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 RASD1Q9Y272 281 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 FLVCR1Q9Y5Y0 555 aa5.9□□□□□ -1.46
SDCBP-208ENST00000520228 DCHS2Q6V1P9 2916 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 PKDREJQ9NTG1 2253 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 A0A1W2PPQ1 181 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 OR5F1O95221 314 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 GOSR1O95249 250 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 LYPD3O95274 346 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 ZNF682O95780 498 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 SERPINA1P01009 418 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 THY1P04216 161 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 IFNW1P05000 195 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 NQO1P15559 274 aaKnown RBP5.89□□□□□ -1.47
SDCBP-208ENST00000520228 NCK1P16333 377 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 ZNF43P17038 809 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 GGT1P19440 569 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 PTNP21246 168 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 GRPRP30550 384 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 IFNA8P32881 189 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 TAS2R41P59536 307 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 CX3CL1P78423 397 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 IL1RL1Q01638 556 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 PMS2P3Q13401 168 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 C1DQ13901 141 aaKnown RBP5.89□□□□□ -1.47
SDCBP-208ENST00000520228 TSC22D1Q15714 1073 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 SAMD4BQ5PRF9 694 aaKnown RBP5.89□□□□□ -1.47
SDCBP-208ENST00000520228 SLC35E4Q6ICL7 350 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 TTC33Q6PID6 262 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-208ENST00000520228 CORO6Q6QEF8 472 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 WDR88Q6ZMY6 472 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 BHLHA15Q7RTS1 189 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-208ENST00000520228 VTCN1Q7Z7D3 282 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 TRPT1Q86TN4 253 aaKnown RBP5.89□□□□□ -1.47
SDCBP-208ENST00000520228 COMMD2Q86X83 199 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 CDC20BQ86Y33 519 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 PGAM4Q8N0Y7 254 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 ARHGAP24Q8N264 748 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 KDM8Q8N371 416 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 RNF148Q8N7C7 305 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 ZIC4Q8N9L1 334 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 FAM162AQ96A26 154 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 TMEM45BQ96B21 275 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 S100PBPQ96BU1 408 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 SLC41A3Q96GZ6 507 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 NSL1Q96IY1 281 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 OXGR1Q96P68 337 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 SLC19A3Q9BZV2 496 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 POLR2J2Q9GZM3 115 aaKnown RBP5.89□□□□□ -1.47
SDCBP-208ENST00000520228 POLR2J3Q9H1A7 115 aaKnown RBP5.89□□□□□ -1.47
SDCBP-208ENST00000520228 B3GAT1Q9P2W7 334 aa5.89□□□□□ -1.47
SDCBP-208ENST00000520228 SEC14L4Q9UDX3 406 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms