RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CABIN1Q9Y6J0 2220 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 SERTM2A0A1B0GWG4 89 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 A0A1W2PRD5 423 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 H7C1H1 209 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 NME4O00746 187 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 CTAG2O75638 210 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 PAHP00439 452 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 IGHV3-11P01762 117 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 GLAP06280 429 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 ME2P23368 584 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 RFC3P40938 356 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 CLDN18P56856 261 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 PPIDQ08752 370 aaKnown RBP2.45□□□□□ -2.02
SQLE-202ENST00000518604 ZNF266Q14584 549 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 ITIH4Q14624 930 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 RNASE13Q5GAN3 156 aaKnown RBP2.45□□□□□ -2.02
SQLE-202ENST00000518604 MYOCDQ8IZQ8 938 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 UBAC2Q8NBM4 344 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 OR56A4Q8NGH8 313 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 OR13G1Q8NGZ3 307 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 C9orf72Q96LT7 481 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 GGTLC1Q9BX51 225 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 ZNF717Q9BY31 904 aaPredicted RBP2.45□□□□□ -2.02
SQLE-202ENST00000518604 SLIRPQ9GZT3 109 aaKnown RBP2.45□□□□□ -2.02
SQLE-202ENST00000518604 PIGUQ9H490 435 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 CLSTN2Q9H4D0 955 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 ACP6Q9NPH0 428 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 RHBDL2Q9NX52 303 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 TBC1D24Q9ULP9 559 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 DOCK9Q9BZ29 2069 aa2.45□□□□□ -2.02
SQLE-202ENST00000518604 GABRR3A8MPY1 467 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 PLPP1O14494 284 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 BCKDKO14874 412 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 RAD1O60671 282 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 FCN3O75636 299 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 CD37P11049 281 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 ANXA8P13928 327 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 ZNF14P17017 642 aaPredicted RBP2.44□□□□□ -2.02
SQLE-202ENST00000518604 CELP19835 753 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 PCK1P35558 622 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 KIR3DL2P43630 455 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 FABP6P51161 128 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 KDSRQ06136 332 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 RAD51Q06609 339 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 ZNF616Q08AN1 781 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 PNOCQ13519 176 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 TRMT5Q32P41 509 aaKnown RBP2.44□□□□□ -2.02
SQLE-202ENST00000518604 YIF1BQ5BJH7 314 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 DNLZQ5SXM8 178 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 ANXA8L1Q5VT79 327 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 RWDD4Q6NW29 188 aaKnown RBP2.44□□□□□ -2.02
SQLE-202ENST00000518604 WDR82Q6UXN9 313 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 TTLQ8NG68 377 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 OR52E5Q8NH55 327 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 RPEQ96AT9 228 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 TEKT3Q9BXF9 490 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 ULBP2Q9BZM5 246 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 BEX1Q9HBH7 125 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 CBY1Q9Y3M2 126 aa2.44□□□□□ -2.02
SQLE-202ENST00000518604 KIF26AQ9ULI4 1882 aaPredicted RBP2.43□□□□□ -2.02
SQLE-202ENST00000518604 IGHV3-72A0A0B4J1Y9 119 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 TRAV25A0A0B4J276 109 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 C5orf63A6NC05 138 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 LRRIQ4A6NIV6 560 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 ERI3O43414 337 aaKnown RBP2.43□□□□□ -2.02
SQLE-202ENST00000518604 XRCC2O43543 280 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 HLA-DQB1P01920 261 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 IFNW1P05000 195 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 FGF4P08620 206 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 ZNF806P0C7X5 589 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 PGA4P0DJD7 388 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 PGA3P0DJD8 388 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 PGA5P0DJD9 388 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 OR8G3PP0DMU2 310 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 RAB5AP20339 215 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 MAGEA1P43355 309 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 ILKQ13418 452 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 GCSAMLQ5JQS6 135 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 PRR9Q5T870 116 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 FAM222AQ5U5X8 452 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
SQLE-202ENST00000518604 OFCC1Q8IZS5 231 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 VKORC1L1Q8N0U8 176 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 C19orf18Q8NEA5 215 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 BPIFCQ8NFQ6 507 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 OR10W1Q8NGF6 305 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 ZNF721Q8TF20 911 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 CTRCQ99895 268 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 IQCGQ9H095 443 aaKnown RBP2.43□□□□□ -2.02
SQLE-202ENST00000518604 LYRM4Q9HD34 91 aa2.43□□□□□ -2.02
SQLE-202ENST00000518604 MRPL22Q9NWU5 206 aaKnown RBP2.43□□□□□ -2.02
SQLE-202ENST00000518604 PCDH11XQ9BZA7 1347 aa2.42□□□□□ -2.02
SQLE-202ENST00000518604 IGKV1D-17A0A075B6S4 117 aa2.42□□□□□ -2.02
SQLE-202ENST00000518604 SMIM26A0A096LP01 95 aa2.42□□□□□ -2.02
SQLE-202ENST00000518604 A0A1B0GUH1 482 aa2.42□□□□□ -2.02
SQLE-202ENST00000518604 OR5H1A6NKK0 313 aa2.42□□□□□ -2.02
SQLE-202ENST00000518604 PLIN3O60664 434 aa2.42□□□□□ -2.02
SQLE-202ENST00000518604 DNAJB6O75190 326 aa2.42□□□□□ -2.02
SQLE-202ENST00000518604 IGKV1-17P01599 117 aa2.42□□□□□ -2.02
SQLE-202ENST00000518604 CD5P06127 495 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms