RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 AHDC1Q5TGY3 1603 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 WI2-2373I1.2A0A1W2PRP0 233 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 OR2AT4A6NND4 320 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 MIF4GDA9UHW6 222 aaKnown RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 ERVV-1B6SEH8 477 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 SMLR1H3BR10 107 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 CLDN34H7C241 214 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 DCTN6O00399 190 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 PRMT5O14744 637 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 AIREO43918 545 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 SLC19A2O60779 497 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 NOS1APO75052 506 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 SCELO95171 688 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 TNFAIP8O95379 198 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 IGHV3-48P01763 117 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 RHOCP08134 193 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 OR8U8P0C7N1 319 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 THRAP10827 490 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 NR2C1P13056 603 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 MGMTP16455 207 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 PGCP20142 388 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 IMPDH1P20839 514 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 BCKDHBP21953 392 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 GABRR1P24046 479 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 FOXN2P32314 431 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 EPHX2P34913 555 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 TNFSF9P41273 254 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 OMPP47874 163 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 IDH3GP51553 393 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 XKP51811 444 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 HNRNPA3P51991 378 aaKnown RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 OR2B8PP59922 312 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 C2orf54Q08AI8 447 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 STX4Q12846 297 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 GK3PQ14409 553 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 TRAM2Q15035 370 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 IL17AQ16552 155 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 RFX4Q33E94 735 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 BSXQ3C1V8 233 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 ACTBL2Q562R1 376 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 SPIN3Q5JUX0 258 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 BRMS1LQ5PSV4 323 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 HACD4Q5VWC8 232 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 REEP3Q6NUK4 255 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 CD300LGQ6UXG3 332 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 ACOT7LQ6ZUV0 252 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 DEFB132Q7Z7B7 95 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 ZNF589Q86UQ0 364 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 TGIF2LYQ8IUE0 185 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 BBS7Q8IWZ6 715 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 PGAM4Q8N0Y7 254 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 LINC01561Q8N1V8 128 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 UBL4BQ8N7F7 174 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 TMEM35BQ8NCS4 154 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 OR10A7Q8NGE5 316 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 OR5M1Q8NGP8 315 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 OR2L8Q8NGY9 312 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 FAM3CQ92520 227 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 CREB3L1Q96BA8 519 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 PPWD1Q96BP3 646 aaKnown RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 ITCHQ96J02 903 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 PPP1R36Q96LQ0 422 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 SLC38A2Q96QD8 506 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 STACQ99469 402 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 TSC22D3Q99576 134 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 TEAD3Q99594 435 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 SLC6A7Q99884 636 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 COPS4Q9BT78 406 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 RSG1Q9BU20 258 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 MAP1LC3CQ9BXW4 147 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 PORCNQ9H237 461 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 TRABDQ9H4I3 376 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 DHX35Q9H5Z1 703 aaKnown RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 NECAP2Q9NVZ3 263 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 PLEKHJ1Q9NW61 149 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 BABAM2Q9NXR7 383 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 STMN3Q9NZ72 180 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 RPS6KB2Q9UBS0 482 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 CYB5R1Q9UHQ9 305 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 ZNF221Q9UK13 617 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 GINS2Q9Y248 185 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 ZNF337Q9Y3M9 751 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 TBL2Q9Y4P3 447 aaKnown RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 TSSC4Q9Y5U2 329 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 ARL5AQ9Y689 179 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 V9GYY9 64 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 KDM5DQ9BY66 1539 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 SCAF11Q99590 1463 aaKnown RBP2.51□□□□□ -2.01
VPS13B-207ENST00000518569 SPHKAPQ2M3C7 1700 aa2.51□□□□□ -2.01
VPS13B-207ENST00000518569 CPDO75976 1380 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 EIF3AQ14152 1382 aaKnown RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 MAST1Q9Y2H9 1570 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 IGHV2-70DA0A0C4DH43 119 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 A0A1B0GWB2 263 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 A0A1W2PQL4 384 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 A6NIZ1 184 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 HIDE1A8MVS5 230 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 ZNF99A8MXY4 864 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-207ENST00000518569 TMEM238C9JI98 176 aa2.5□□□□□ -2.01
VPS13B-207ENST00000518569 F5H6K3 240 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms