RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CPNE4Q96A23 557 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 TAMM41Q96BW9 452 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SLC25A36Q96CQ1 311 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ZHX1-C8orf76Q96EF9 292 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ZNF347Q96SE7 839 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SEPHS2Q99611 448 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 WFDC6Q9BQY6 131 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 PCGF1Q9BSM1 259 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 THTPAQ9BU02 230 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ABHD14AQ9BUJ0 271 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SSBP3Q9BWW4 388 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 TAPBPLQ9BX59 468 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SRXN1Q9BYN0 137 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 DCLRE1BQ9H816 532 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ELOVL3Q9HB03 270 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 KCNJ16Q9NPI9 418 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 PTTG2Q9NZH5 202 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 KLHL13Q9P2N7 655 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 RHCGQ9UBD6 479 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SLC7A7Q9UM01 511 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 B9D1Q9UPM9 204 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 FAM32AQ9Y421 112 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 V9GYQ6 96 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CROCCQ5TZA2 2017 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 RELNP78509 3460 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 NBASA2RRP1 2371 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CPAMD8Q8IZJ3 1885 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 TRAPPC13A5PLN9 417 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 MARCH11A6NNE9 402 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 FAAHO00519 579 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 KPNA4O00629 521 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 SULT1B1O43704 296 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 EIF1BO60739 113 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 AQP8O94778 261 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 TOXO94900 526 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 AHSA1O95433 338 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 NTN1O95631 604 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CLDN1O95832 211 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 IFNW1P05000 195 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 GPIP06744 558 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 GGT1P19440 569 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 MSR1P21757 451 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 DUSP1P28562 367 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CEACAM8P31997 349 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 OPRM1P35372 400 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CDX1P47902 265 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 RASSF2P50749 326 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 PPT1P50897 306 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ZNF136P52737 540 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CRYBA2P53672 197 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 RPS7P62081 194 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 RAB11AP62491 216 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SLC35A1P78382 337 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 MYBPC1Q00872 1141 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 PJVKQ0ZLH3 352 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 FOXF2Q12947 444 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CEACAM7Q14002 265 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CDSNQ15517 529 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 NPTX1Q15818 432 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 RAB11BQ15907 218 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ZNF239Q16600 458 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 NRF1Q16656 503 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 C1orf140Q5VVS0 124 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 AGAP6Q5VW22 663 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SP5Q6BEB4 398 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 TMEM225Q6GV28 225 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 TTC33Q6PID6 262 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 UQCC3Q6UW78 93 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 PQLC2Q6ZP29 291 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 TMPPEQ6ZT21 453 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CYP4Z1Q86W10 505 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CSNK2A3Q8NEV1 391 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 OR4D11Q8NGI4 311 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 TRMT10AQ8TBZ6 339 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 ADAMTS16Q8TE57 1224 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 GPX8Q8TED1 209 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 GLYATL2Q8WU03 294 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ABHD3Q8WU67 409 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 TMEM170AQ8WVE7 144 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 GEMIN6Q8WXD5 167 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 PIGCQ92535 297 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 HIST1H2ACQ93077 130 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SLC35B4Q969S0 331 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 RFT1Q96AA3 541 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 CCDC124Q96CT7 223 aaKnown RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 ADGRG7Q96K78 797 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 GFI1Q99684 422 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 ARHGDIGQ99819 225 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 BTBD10Q9BSF8 475 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 FNDC11Q9BVV2 318 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 SFXN3Q9BWM7 321 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 HINT2Q9BX68 163 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 RSPO3Q9BXY4 272 aaPredicted RBP2.41□□□□□ -2.02
SKP1-204ENST00000517691 POTEKPQ9BYX7 375 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 DPAGT1Q9H3H5 408 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 GAL3ST2Q9H3Q3 398 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 RNF122Q9H9V4 155 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 Q9N2K0 584 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 TRIM36Q9NQ86 728 aa2.41□□□□□ -2.02
SKP1-204ENST00000517691 MRPL22Q9NWU5 206 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms