RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ZNF555Q8NEP9 628 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 OR2T12Q8NG77 320 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 OR10S1Q8NGN2 331 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 OR6K3Q8NGY3 331 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 OR52P1PQ8NH57 321 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 OR10A6Q8NH74 314 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 ZFAND1Q8TCF1 268 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 PHOSPHO1Q8TCT1 267 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 DNAJA4Q8WW22 397 aaPredicted RBP2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 IPCEF1Q8WWN9 437 aaPredicted RBP2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 FCGR1BQ92637 280 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 RAB8BQ92930 207 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 CPNE4Q96A23 557 aaPredicted RBP2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 RAB39BQ96DA2 213 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 LGALS12Q96DT0 336 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 DMRTB1Q96MA1 342 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 SFXN2Q96NB2 322 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 WDFY2Q96P53 400 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 SRSF8Q9BRL6 282 aaKnown RBP2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 TMEM246Q9BRR3 403 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 CENPOQ9BU64 300 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 CCDC32Q9BV29 185 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 TAPBPLQ9BX59 468 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 PINK1Q9BXM7 581 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 RTN4RQ9BZR6 473 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 SLC19A3Q9BZV2 496 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 MIXL1Q9H2W2 232 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 RNF167Q9H6Y7 350 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 SMURF1Q9HCE7 757 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 RETNQ9HD89 108 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 MMP26Q9NRE1 261 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 DCAF13Q9NV06 445 aaKnown RBP2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 MED11Q9P086 117 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 EIF3KQ9UBQ5 218 aaKnown RBP2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 PSORS1C1Q9UIG5 152 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 DKKL1Q9UK85 242 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 FBXL2Q9UKC9 423 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF443Q9Y2A4 671 aaPredicted RBP2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 LSM2Q9Y333 95 aaKnown RBP2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 HDGFL3Q9Y3E1 203 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF337Q9Y3M9 751 aa2.59□□□□□ -1.99
SCARNA13-201ENST00000516672 PCNX3Q9H6A9 2034 aa2.59□□□□□ -2
SCARNA13-201ENST00000516672 IGKV3D-15A0A087WSY6 115 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 TRAV40A0A0B4J280 105 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 A0A1W2PQ09 198 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 MEIOCA2RUB1 952 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 LINC00862A6NCI5 91 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 OR6C65A6NJZ3 312 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 ZNF724A8MTY0 619 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 A8MVM7 634 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 LEUTXA8MZ59 168 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 B4DXG7 233 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 B9A039 149 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 PTGES3LE9PB15 166 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 LOC110117498-PIK3R3F6TDL0 507 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 hCG_2039718K7EN88 272 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 GPR171O14626 319 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 AIREO43918 545 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 NPIPB7O75200 414 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 NME6O75414 186 aaPredicted RBP2.58□□□□□ -2
SCARNA13-201ENST00000516672 GPX5O75715 221 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 OR5F1O95221 314 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 BRI3O95415 125 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 PMS2P2O95744 297 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 NUDT14O95848 222 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 MT-ATP6P00846 226 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 CST1P01037 141 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 IGHV2-5P01817 119 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 HLA-DQB1P01920 261 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 BCHEP06276 602 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 CDK1P06493 297 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 ERCC1P07992 297 aaPredicted RBP2.58□□□□□ -2
SCARNA13-201ENST00000516672 HCKP08631 526 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 NUDT7P0C024 238 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 ADORA3P0DMS8 318 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 IL7P13232 177 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 M6PRP20645 277 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 PRKACGP22612 351 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 CBLP22681 906 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 CXCR1P25024 350 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 IFNA8P32881 189 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 SERPINF1P36955 418 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 RBM34P42696 430 aaKnown RBP2.58□□□□□ -2
SCARNA13-201ENST00000516672 OR3A3P47888 321 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 IDH2P48735 452 aaKnown RBP2.58□□□□□ -2
SCARNA13-201ENST00000516672 STARP49675 285 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 TMEM33P57088 247 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 SMIM11AP58511 58 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 SLC35A1P78382 337 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 H3F3AP84243 136 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 HOXC5Q00444 222 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 IL5RAQ01344 420 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 PLAURQ03405 335 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 TNP2Q05952 138 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 ASAH1Q13510 395 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 DGCR6Q14129 220 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 QPRTQ15274 297 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 TOMM20Q15388 145 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 SSX1Q16384 188 aa2.58□□□□□ -2
SCARNA13-201ENST00000516672 ZNF239Q16600 458 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms