RNA–Protein interactions for RNA: ENST00000516130.1

RNU6-1278P-201, Transcript of RNA, U6 small nuclear 1278, pseudogene, humanhuman

BASIC

Gene RNU6-1278P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1278P-201ENST00000516130 SAMSN1Q9NSI8 373 aaKnown RBP0.66□□□□□ -2.3
RNU6-1278P-201ENST00000516130 DCAF16Q9NXF7 216 aa0.66□□□□□ -2.3
RNU6-1278P-201ENST00000516130 CCDC59Q9P031 241 aaKnown RBP0.66□□□□□ -2.3
RNU6-1278P-201ENST00000516130 PDP1Q9P0J1 537 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1278P-201ENST00000516130 R4GN34 69 aa0.66□□□□□ -2.3
RNU6-1278P-201ENST00000516130 RPRD2Q5VT52 1461 aaKnown RBP0.66□□□□□ -2.3
RNU6-1278P-201ENST00000516130 ATAD2BQ9ULI0 1458 aa0.66□□□□□ -2.3
RNU6-1278P-201ENST00000516130 OR2AG2A6NM03 316 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 CEACAM18A8MTB9 384 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 SIRPB1O00241 398 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 TAAR5O14804 337 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 EIF3HO15372 352 aaKnown RBP eCLIP0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 CLOCKO15516 846 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 PLIN3O60664 434 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 EIF1BO60739 113 aaKnown RBP0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 DEDDO75618 318 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 OR2J3O76001 311 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 GLAP06280 429 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 PGA4P0DJD7 388 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 PGA3P0DJD8 388 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 PGA5P0DJD9 388 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 CD28P10747 220 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 CSNK2A2P19784 350 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 RAB4AP20338 218 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 MPV17P39210 176 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 TNFSF9P41273 254 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 EIF1P41567 113 aaKnown RBP0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 RAB10P61026 200 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 TNFRSF9Q07011 255 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 SP6Q3SY56 376 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 YIF1BQ5BJH7 314 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 XKR7Q5GH72 579 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 GCSAMLQ5JQS6 135 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 C9orf135Q5VTT2 229 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 REEP3Q6NUK4 255 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 PRSS54Q6PEW0 395 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 SMARCD3Q6STE5 483 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 LINC00336Q6ZUF6 198 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 SLC16A14Q7RTX9 510 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 NT5DC3Q86UY8 548 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 FAM228AQ86W67 206 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 FAM71AQ8IYT1 594 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 GTPBP8Q8N3Z3 284 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 CSGALNACT2Q8N6G5 542 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 NECAB1Q8N987 351 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 OR10W1Q8NGF6 305 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 OR1L1Q8NH94 360 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 OR5K2Q8NHB8 316 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 RAB3IL1Q8TBN0 382 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 SLC2A14Q8TDB8 520 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 N4BP2L2Q92802 583 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 GHSRQ92847 366 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 SLIRPQ9GZT3 109 aaKnown RBP0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 ANKRA2Q9H9E1 313 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 RETNQ9HD89 108 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 MED4Q9NPJ6 270 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 UXTQ9UBK9 157 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 SLC17A4Q9Y2C5 497 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 MMACHCQ9Y4U1 282 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 AK9Q5TCS8 1911 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 NACADO15069 1562 aa0.65□□□□□ -2.31
RNU6-1278P-201ENST00000516130 ADGRA3Q8IWK6 1321 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 FHOD3Q2V2M9 1422 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 SIGLEC1Q9BZZ2 1709 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 MIA3Q5JRA6 1907 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 HELZ2Q9BYK8 2649 aaKnown RBP0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 CCL15-CCL14A0A0B4J2E2 113 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 C4orf51C9J302 202 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 MFNGO00587 321 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 GABRPO00591 440 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 NDUFAB1O14561 156 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 CPLX1O14810 134 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 AIM2O14862 343 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 OR7C2O60412 319 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 ASGR1P07306 291 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 ZNF35P13682 527 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 NELFEP18615 380 aaKnown RBP0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 TNNI1P19237 187 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 USF1P22415 310 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 PSMD8P48556 350 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 UBE2E1P51965 193 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 ZNF121P58317 390 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 TAS2R46P59540 309 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 EIF3EP60228 445 aaKnown RBP0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 ACTR3P61158 418 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 MEF2CQ06413 473 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 DGCR6Q14129 220 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 DMC1Q14565 340 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 ZNF266Q14584 549 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 TRAM2Q15035 370 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 SSX2Q16385 188 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 CCL15Q16663 113 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 LUZP6Q538Z0 58 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 KLHL12Q53G59 568 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 TMEM69Q5SWH9 247 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 C22orf42Q6IC83 251 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 MRPL55Q7Z7F7 128 aaKnown RBP0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 CMC1Q7Z7K0 106 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 ARL6IP6Q8N6S5 226 aa0.64□□□□□ -2.31
RNU6-1278P-201ENST00000516130 C19orf18Q8NEA5 215 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms