RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 HIKESHIQ53FT3 197 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 HES5Q5TA89 166 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ASPHD2Q6ICH7 369 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 SEM1Q6ZVN7 128 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 BTLAQ7Z6A9 289 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 SERPINA12Q8IW75 414 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 CCDC36Q8IYA8 594 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 PARP16Q8N5Y8 322 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 CPEB3Q8NE35 698 aaKnown RBP6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 CCDC54Q8NEL0 328 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 DNAAF1Q8NEP3 725 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 C1orf162Q8NEQ5 155 aaPredicted RBP6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 OR1J2Q8NGS2 313 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ZNF671Q8TAW3 534 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 TRMT10AQ8TBZ6 339 aaKnown RBP6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 SNRNP40Q96DI7 357 aaKnown RBP6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 DIRAS2Q96HU8 199 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 GFI1Q99684 422 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 MRI1Q9BV20 369 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 PRORYQ9H606 182 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 PLEKHA1Q9HB21 404 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ASF1BQ9NVP2 202 aa6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 TLN1Q9Y490 2541 aaKnown RBP6.66□□□□□ -1.34
SCARNA20.1-201ENST00000516009 MED19A0JLT2 244 aaPredicted RBP6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ZNF503-AS2A6NEH8 195 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 FABP12A6NFH5 140 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 FAM25AB3EWG3 89 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 FAM25CB3EWG5 89 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 FAM25GB3EWG6 89 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 E9PLN8 166 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 MTRF1O75570 445 aaKnown RBP6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 RAD51DO75771 328 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 DHRS3O75911 302 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 LYZL6O75951 148 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 TOXO94900 526 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 IGLV3-1P01715 115 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 GLI4P10075 376 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 CALCBP10092 127 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 SFTPCP11686 197 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 HOXB1P14653 301 aaPredicted RBP6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 RAB3AP20336 220 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 COX5AP20674 150 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 STOMP27105 288 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 HOXC12P31275 282 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 APLNRP35414 380 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 DDOSTP39656 456 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 HGFACQ04756 655 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 P2RY6Q15077 328 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 GABRA6Q16445 453 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 GSG1Q2KHT4 349 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 SNAI3Q3KNW1 292 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 PRR30Q53SZ7 412 aaPredicted RBP6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 GLT8D1Q68CQ7 371 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 CNIH2Q6PI25 160 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 FAM131AQ6UXB0 335 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 PGAP1Q75T13 922 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 LRRC28Q86X40 367 aaPredicted RBP6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 DOLPP1Q86YN1 238 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 GABRG1Q8N1C3 465 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 NKAIN3Q8N8D7 197 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 SAMD12Q8N8I0 201 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ZNF610Q8N9Z0 462 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 PLPP7Q8NBV4 271 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 OR1M1Q8NGA1 313 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 OR5D14Q8NGL3 314 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 OR14K1Q8NGZ2 314 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 LGALS14Q8TCE9 139 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 SGK3Q96BR1 496 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 STARD4Q96DR4 205 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ADAT3Q96EY9 351 aaPredicted RBP6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 REEP6Q96HR9 211 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 NOX3Q9HBY0 568 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 B3GNT2Q9NY97 397 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ZNF391Q9UJN7 358 aa6.65□□□□□ -1.34
SCARNA20.1-201ENST00000516009 MYO7BQ6PIF6 2116 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 SPENQ96T58 3664 aaKnown RBP6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 LOC100509620A0A075B734 347 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 A0A0B4J203 849 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 LOC390937A0A1W2PQ73 354 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 C5orf49A4QMS7 147 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 C5orf63A6NC05 138 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 A6NIN4 97 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 XRCC2O43543 280 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 PAHP00439 452 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CGAP01215 116 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 APOA1P02647 267 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 SERPINA5P05154 406 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ERCC1P07992 297 aaPredicted RBP6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 EDN3P14138 238 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 SNRPBP14678 240 aaKnown RBP6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ELK1P19419 428 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CCNOP22674 350 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 ANOS1P23352 680 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CFPP27918 469 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 BDKRB2P30411 391 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 CEACAM8P31997 349 aaPredicted RBP6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 THBS4P35443 961 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 TALDO1P37837 337 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 EVX1P49640 407 aa6.64□□□□□ -1.35
SCARNA20.1-201ENST00000516009 SCAND1P57086 179 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms