RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 GK2Q14410 553 aaPredicted RBP10.18□□□□□ -0.78
SNF8-215ENST00000515572 SMN1Q16637 294 aaKnown RBP10.18□□□□□ -0.78
SNF8-215ENST00000515572 ZNF684Q5T5D7 378 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 SHEQ5VZ18 495 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 PRSS57Q6UWY2 283 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 FAM57BQ71RH2 274 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 PGAP1Q75T13 922 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 SSX6Q7RTT6 188 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 FAM220AQ7Z4H9 259 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 KCTD20Q7Z5Y7 419 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 NEU4Q8WWR8 484 aaPredicted RBP10.18□□□□□ -0.78
SNF8-215ENST00000515572 ITFG2Q969R8 447 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 SPSB4Q96A44 273 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 CMBLQ96DG6 245 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 PGAM5Q96HS1 289 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 DIRC2Q96SL1 478 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
SNF8-215ENST00000515572 ANKRD60Q9BZ19 345 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 TTTY10Q9BZA0 68 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 AMBNQ9NP70 447 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 BRD7Q9NPI1 651 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 MRM2Q9UI43 246 aaKnown RBP10.18□□□□□ -0.78
SNF8-215ENST00000515572 PURGQ9UJV8 347 aaKnown RBP10.18□□□□□ -0.78
SNF8-215ENST00000515572 ZDHHC8Q9ULC8 765 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 RAB26Q9ULW5 256 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 NOTCH2Q04721 2471 aa10.18□□□□□ -0.78
SNF8-215ENST00000515572 CHD3Q12873 2000 aaKnown RBP10.17□□□□□ -0.78
SNF8-215ENST00000515572 EFCAB10A6NFE3 127 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 C17orf100A8MU93 164 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 F12P00748 615 aaPredicted RBP10.17□□□□□ -0.78
SNF8-215ENST00000515572 ADH4P08319 380 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 ALDH3B1P43353 468 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 ZNF81P51508 661 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 MMP15P51511 669 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 ZNF92Q03936 586 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 HLXQ14774 488 aaPredicted RBP10.17□□□□□ -0.78
SNF8-215ENST00000515572 TIGD6Q17RP2 521 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 PCGF3Q3KNV8 242 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 CDONQ4KMG0 1287 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 GLYATL3Q5SZD4 288 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 YIPF7Q8N8F6 280 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 OR52I1Q8NGK6 324 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 SORCS2Q96PQ0 1159 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 JAM3Q9BX67 310 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 FGF20Q9NP95 211 aaPredicted RBP10.17□□□□□ -0.78
SNF8-215ENST00000515572 PLCXD1Q9NUJ7 323 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 FAM206AQ9NX38 181 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 NKIRAS2Q9NYR9 191 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 ITGB1BP2Q9UKP3 347 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 N6AMT1Q9Y5N5 214 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 R4GMQ9 66 aa10.17□□□□□ -0.78
SNF8-215ENST00000515572 ARID1AO14497 2285 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 A0A0U1RQV5 110 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 IQCF6A8MYZ5 107 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 LOC110117498-PIK3R3F6TDL0 507 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 FAM20BO75063 409 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 SRSF10O75494 262 aaKnown RBP10.16□□□□□ -0.78
SNF8-215ENST00000515572 IGHV4-39P01824 125 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 NAT2P11245 290 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 PIPP12273 146 aaPredicted RBP10.16□□□□□ -0.78
SNF8-215ENST00000515572 MYF6P23409 242 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 DCKP27707 260 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 DDOSTP39656 456 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 MED21Q13503 144 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 GALEQ14376 348 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 SNCBQ16143 134 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 ALKBH6Q3KRA9 238 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 TMEM255AQ5JRV8 349 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 FAM209AQ5JX71 171 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 LIPNQ5VXI9 398 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 OR2T2Q6IF00 324 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 SYS1Q8N2H4 156 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 OR8G5Q8NG78 346 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 OR2AE1Q8NHA4 323 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 HAVCR2Q8TDQ0 301 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 SGK3Q96BR1 496 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 REEP6Q96HR9 211 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 ZNF184Q99676 751 aaPredicted RBP10.16□□□□□ -0.78
SNF8-215ENST00000515572 ALG8Q9BVK2 526 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 TPK1Q9H3S4 243 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 Q9H521 79 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 MYOZ1Q9NP98 299 aaPredicted RBP10.16□□□□□ -0.78
SNF8-215ENST00000515572 ERVK13-1Q9NX77 482 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 CNOT2Q9NZN8 540 aaKnown RBP10.16□□□□□ -0.78
SNF8-215ENST00000515572 NUFIP1Q9UHK0 495 aaKnown RBP10.16□□□□□ -0.78
SNF8-215ENST00000515572 GNG8Q9UK08 70 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 MYRFQ9Y2G1 1151 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 SNX5Q9Y5X3 404 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 USF3Q68DE3 2245 aa10.16□□□□□ -0.78
SNF8-215ENST00000515572 C5orf63A6NC05 138 aa10.15□□□□□ -0.78
SNF8-215ENST00000515572 GGT3PA6NGU5 568 aa10.15□□□□□ -0.78
SNF8-215ENST00000515572 ZSCAN5BA6NJL1 495 aa10.15□□□□□ -0.78
SNF8-215ENST00000515572 CD300LBA8K4G0 201 aa10.15□□□□□ -0.78
SNF8-215ENST00000515572 MAGEB4O15481 346 aaPredicted RBP10.15□□□□□ -0.78
SNF8-215ENST00000515572 PNPP00491 289 aa10.15□□□□□ -0.78
SNF8-215ENST00000515572 CSF3P09919 207 aa10.15□□□□□ -0.78
SNF8-215ENST00000515572 MYL12AP19105 171 aa10.15□□□□□ -0.78
SNF8-215ENST00000515572 TNFSF4P23510 183 aa10.15□□□□□ -0.78
SNF8-215ENST00000515572 MRPS11P82912 194 aaKnown RBP10.15□□□□□ -0.78
SNF8-215ENST00000515572 MFGE8Q08431 387 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms