RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 OR2V2Q96R30 315 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 SHARPINQ9H0F6 387 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 NIPAL2Q9H841 368 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 TMEM106BQ9NUM4 274 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 TMEM100Q9NV29 134 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 TVP23BQ9NYZ1 205 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 PPP1R3CQ9UQK1 317 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 CACNG2Q9Y698 323 aa10.81□□□□□ -0.68
CLCN3-210ENST00000515420 WNT9BO14905 357 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 FSTL3O95633 263 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 FAM157CP0CG43 387 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 CFL1P23528 166 aaKnown RBP10.8□□□□□ -0.68
CLCN3-210ENST00000515420 DDOSTP39656 456 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 GATA4P43694 442 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 CX3CR1P49238 355 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 PRKXP51817 358 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 RPS7P62081 194 aaKnown RBP10.8□□□□□ -0.68
CLCN3-210ENST00000515420 EFNB1P98172 346 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 MVKQ03426 396 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 APOFQ13790 326 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 ZNF181Q2M3W8 571 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 SPRNQ5BIV9 151 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 NXNL2Q5VZ03 156 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 C12orf73Q69YU5 71 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 SLC16A9Q7RTY1 509 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 GLCCI1Q86VQ1 547 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 KLBQ86Z14 1044 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 BHLHE23Q8NDY6 225 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 BBS1Q8NFJ9 593 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 OR52H1Q8NGJ2 320 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 SPRYD4Q8WW59 207 aaPredicted RBP10.8□□□□□ -0.68
CLCN3-210ENST00000515420 ERGIC1Q969X5 290 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 MEGF10Q96KG7 1140 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 BEX2Q9BXY8 128 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 YIPF3Q9GZM5 350 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 NARFLQ9H6Q4 476 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 ZNF665Q9H7R5 613 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 MRPL15Q9P015 296 aaKnown RBP10.8□□□□□ -0.68
CLCN3-210ENST00000515420 TMEFF2Q9UIK5 374 aaPredicted RBP10.8□□□□□ -0.68
CLCN3-210ENST00000515420 OAZ3Q9UMX2 235 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 NPTNQ9Y639 398 aa10.8□□□□□ -0.68
CLCN3-210ENST00000515420 ANK3Q12955 4377 aaKnown RBP10.79□□□□□ -0.68
CLCN3-210ENST00000515420 SLC22A31A6NKX4 558 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 CD300LBA8K4G0 201 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 MLNRO43193 412 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 GMDSO60547 372 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 SELENOFO60613 162 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 MITFO75030 526 aaPredicted RBP10.79□□□□□ -0.68
CLCN3-210ENST00000515420 IFNA2P01563 188 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 IGHV2-70P01814 119 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 IGHV2-5P01817 119 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 MSMBP08118 114 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 H2BFMP0C1H6 154 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 CPT2P23786 658 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 CD200P41217 278 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 ZNF92Q03936 586 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 KPNB1Q14974 876 aaKnown RBP10.79□□□□□ -0.68
CLCN3-210ENST00000515420 TMEM155Q4W5P6 130 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 GLYATL3Q5SZD4 288 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 AVPI1Q5T686 147 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 DEGS2Q6QHC5 323 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 PRSS45Q7RTY3 260 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 PRIMA1Q86XR5 153 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 OR10AD1Q8NGE0 317 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 OR51F2Q8NH61 342 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 TMEM163Q8TC26 289 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 PYDC1Q8WXC3 89 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 ITFG2Q969R8 447 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 TEAD3Q99594 435 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 CIB1Q99828 191 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 RBM4BQ9BQ04 359 aaKnown RBP10.79□□□□□ -0.68
CLCN3-210ENST00000515420 GABARAPL3Q9BY60 117 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 SEMA6AQ9H2E6 1030 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 RGCCQ9H4X1 137 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 GCM1Q9NP62 436 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 TREM2Q9NZC2 230 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 ZNF391Q9UJN7 358 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 TMEM14AQ9Y6G1 99 aa10.79□□□□□ -0.68
CLCN3-210ENST00000515420 TRAV20A0A0B4J274 112 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 CCDC182A6NF36 153 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 GGT3PA6NGU5 568 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 FAM157AC9JC47 383 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 H3BNX3 289 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 PRKYO43930 277 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 ANXA2P07355 339 aaKnown RBP10.78□□□□□ -0.68
CLCN3-210ENST00000515420 ALOX5APP20292 161 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 EPHA2P29317 976 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 THBS2P35442 1172 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 NAA10P41227 235 aaPredicted RBP10.78□□□□□ -0.68
CLCN3-210ENST00000515420 MMP16P51512 607 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 RAD23AP54725 363 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 BTG1P62324 171 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 SNCBQ16143 134 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 FAM120AOSQ5T036 256 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 KCTD18Q6PI47 426 aaPredicted RBP10.78□□□□□ -0.68
CLCN3-210ENST00000515420 SPATC1Q76KD6 591 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.78□□□□□ -0.68
CLCN3-210ENST00000515420 GID4Q8IVV7 300 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 C1orf87Q8N0U7 546 aa10.78□□□□□ -0.68
CLCN3-210ENST00000515420 MUC20Q8N307 709 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms