RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 PHF7Q9BWX1 381 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-214ENST00000515035 MMP26Q9NRE1 261 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 DHCR7Q9UBM7 475 aaKnown RBP12.07□□□□□ -0.48
TCOF1-214ENST00000515035 PLEKHB1Q9UF11 243 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-214ENST00000515035 A0A1W2PR48 441 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 FAM221AA4D161 298 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 TMEM202A6NGA9 273 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 SLC6A12P48065 614 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 EGR3Q06889 387 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 HGDQ93099 445 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 MS4A6EQ96DS6 147 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 CALHM2Q9HA72 323 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 ZNF355PQ9NSJ1 428 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 THAP10Q9P2Z0 257 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-214ENST00000515035 ZNF346Q9UL40 294 aaKnown RBP12.07□□□□□ -0.48
TCOF1-214ENST00000515035 GLAP06280 429 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 ST3GAL2Q16842 350 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 SIGLEC11Q96RL6 698 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 TMEFF2Q9UIK5 374 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-214ENST00000515035 FBXO4Q9UKT5 387 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 MMACHCQ9Y4U1 282 aa12.07□□□□□ -0.48
TCOF1-214ENST00000515035 MAST2Q6P0Q8 1798 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 TMPRSS11DO60235 418 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 GUCA2AQ02747 115 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 TMEM128Q5BJH2 165 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 AGBL4Q5VU57 503 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 WDFY2Q96P53 400 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 BCL2L10Q9HD36 194 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 CYB5R1Q9UHQ9 305 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 PPP1R3CQ9UQK1 317 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 CCDC187A0A096LP49 1063 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 OR7C2O60412 319 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 CDK5Q00535 292 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 DUSP8Q13202 625 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 FXNQ16595 210 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 GGNBP1Q5YKI7 109 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 ELSPBP1Q96BH3 223 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 ARSGQ96EG1 525 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 GPR84Q9NQS5 396 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 DLL4Q9NR61 685 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 CCL26Q9Y258 94 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-214ENST00000515035 GFYI3L273 518 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 NDUFB6O95139 128 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 SBK3P0C264 359 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 ABOP16442 354 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 HSF1Q00613 529 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 OR2B11Q5JQS5 317 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 TMEM104Q8NE00 496 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 CORO2AQ92828 525 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 NMES1Q9C002 83 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 RIMS4Q9H426 269 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-214ENST00000515035 UBE2ZQ9H832 354 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-214ENST00000515035 LYRM2Q9NU23 88 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-214ENST00000515035 WBP1LQ9NX94 342 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 DAPP1Q9UN19 280 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 NINQ8N4C6 2090 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 TMEM127O75204 238 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 SCRG1O75711 98 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 NOVA1P51513 510 aaKnown RBP12.06□□□□□ -0.48
TCOF1-214ENST00000515035 PPP1CBP62140 327 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 NKG7Q16617 165 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 MAML2Q8IZL2 1156 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-214ENST00000515035 OR2G2Q8NGZ5 317 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 HDAC8Q9BY41 377 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 LYRM4Q9HD34 91 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 SLC5A6Q9Y289 635 aa12.06□□□□□ -0.48
TCOF1-214ENST00000515035 HSPB2A8KAH6 182 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 KLK8O60259 260 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 PMCHP20382 165 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 IRS1P35568 1242 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 SSR4P51571 173 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 HSPB2Q16082 182 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 CDKN3Q16667 212 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 ANKRD16Q6P6B7 361 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 TMEM229BQ8NBD8 167 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 APH1AQ96BI3 265 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 NXF2Q9GZY0 626 aaKnown RBP12.05□□□□□ -0.48
TCOF1-214ENST00000515035 SCN7AQ01118 1682 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 GRPP07492 148 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 MAMSTRQ6ZN01 415 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 AGBL5Q8NDL9 886 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 GOT1L1Q8NHS2 421 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-214ENST00000515035 CXCL16Q9H2A7 254 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 PSENENQ9NZ42 101 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 DUSP13Q9UII6 198 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 MYO5AQ9Y4I1 1855 aaKnown RBP12.05□□□□□ -0.48
TCOF1-214ENST00000515035 SIGLEC6O43699 453 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 IGHEP01854 428 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 DEFA4P12838 97 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 FGF9P31371 208 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-214ENST00000515035 RPL18Q07020 188 aaKnown RBP12.05□□□□□ -0.48
TCOF1-214ENST00000515035 CAMKMTQ7Z624 323 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 DEFB123Q8N688 67 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 CXorf58Q96LI9 332 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 DOK1Q99704 481 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 WSB1Q9Y6I7 421 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 COL18A1P39060 1754 aa12.05□□□□□ -0.48
TCOF1-214ENST00000515035 ANKRD36CQ5JPF3 1778 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms