RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 N6AMT1Q9Y5N5 214 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 TNRC6AQ8NDV7 1962 aaKnown RBP13.11□□□□□ -0.31
VCAN-211ENST00000513984 CIB4A0PJX0 185 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 F5H5K5 113 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 ERCC1P07992 297 aaPredicted RBP13.11□□□□□ -0.31
VCAN-211ENST00000513984 TRAPPC2P0DI81 140 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 TRAPPC2BP0DI82 140 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 CCL11P51671 97 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 ECH1Q13011 328 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 CLN3Q13286 438 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 RNFT1Q5M7Z0 435 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 TSPO2Q5TGU0 170 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 PGAP1Q75T13 922 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 SLC22A24Q8N4F4 322 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 FNDC9Q8TBE3 224 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 GCDHQ92947 438 aaPredicted RBP13.11□□□□□ -0.31
VCAN-211ENST00000513984 PTX4Q96A99 478 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 DIABLOQ9NR28 239 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 CSAG2Q9Y5P2 127 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 MED12LQ86YW9 2145 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 OR6C65A6NJZ3 312 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 ECDO95905 644 aaPredicted RBP13.1□□□□□ -0.31
VCAN-211ENST00000513984 ABOP16442 354 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 SLC6A9P48067 706 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 RNPS1Q15287 305 aaKnown RBP13.1□□□□□ -0.31
VCAN-211ENST00000513984 KRTAP27-1Q3LI81 207 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 MTFR2Q6P444 385 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.1□□□□□ -0.31
VCAN-211ENST00000513984 NAA40Q86UY6 237 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 TUSC5Q8IXB3 177 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 OR52N4Q8NGI2 321 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 OR4D6Q8NGJ1 314 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 OR13C9Q8NGT0 318 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 OR14K1Q8NGZ2 314 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 FAM71F1Q96KD3 344 aaPredicted RBP13.1□□□□□ -0.31
VCAN-211ENST00000513984 LYZL4Q96KX0 146 aa13.1□□□□□ -0.31
VCAN-211ENST00000513984 FAM186AA6NE01 2351 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 TRGV5A0A0B4J1U4 118 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 C5orf63A6NC05 138 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 OR6C6A6NF89 314 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 ZNF891A8MT65 544 aaPredicted RBP13.09□□□□□ -0.31
VCAN-211ENST00000513984 RPL36A-HNRNPH2H7BZ11 118 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 DBHP09172 617 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 CPN1P15169 458 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 ZNF32P17041 273 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 AP3S2P59780 193 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 PCBD1P61457 104 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 TATDN3Q17R31 274 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 DRAM2Q6UX65 266 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 PLXDC2Q6UX71 529 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 CDH26Q8IXH8 852 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 OR5AS1Q8N127 324 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 CCDC54Q8NEL0 328 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 OR1F12Q8NHA8 337 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 SLC7A6Q92536 515 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 COL25A1Q9BXS0 654 aaPredicted RBP13.09□□□□□ -0.31
VCAN-211ENST00000513984 DEFB127Q9H1M4 99 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 DPAGT1Q9H3H5 408 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 EXO5Q9H790 373 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 CNTD2Q9H8S5 307 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 COPZ2Q9P299 210 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 V9GYS6 101 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 GVINP1Q7Z2Y8 2422 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 A0A0A6YYH2 397 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 HMX3A6NHT5 357 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 A6NJ64 397 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 PROB1E7EW31 1015 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 DHRS3O75911 302 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 KDM4BO94953 1096 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 RAB6AP20340 208 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 HLA-DMAP28067 261 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 BTG1P62324 171 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 C3AR1Q16581 482 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 GFOD2Q3B7J2 385 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 ZNF774Q6NX45 483 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 SLC16A14Q7RTX9 510 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 PHF21AQ96BD5 680 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 WDYHV1Q96HA8 205 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 PRRG4Q9BZD6 226 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 LDAHQ9H6V9 325 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 SLC7A10Q9NS82 523 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 SPRR3Q9UBC9 169 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 KLK11Q9UBX7 282 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 TIMM10BQ9Y5J6 103 aa13.09□□□□□ -0.31
VCAN-211ENST00000513984 ANKRD20A5PA0PJZ0 165 aa13.08□□□□□ -0.32
VCAN-211ENST00000513984 INMT-MINDY4F8WBC2 141 aa13.08□□□□□ -0.32
VCAN-211ENST00000513984 CEACAM4O75871 244 aa13.08□□□□□ -0.32
VCAN-211ENST00000513984 FARS2O95363 451 aaKnown RBP13.08□□□□□ -0.32
VCAN-211ENST00000513984 BPNT1O95861 308 aa13.08□□□□□ -0.32
VCAN-211ENST00000513984 YES1P07947 543 aa13.08□□□□□ -0.32
VCAN-211ENST00000513984 PTHLHP12272 177 aa13.08□□□□□ -0.32
VCAN-211ENST00000513984 EIF2B2P49770 351 aaKnown RBP13.08□□□□□ -0.32
VCAN-211ENST00000513984 SNTB2Q13425 540 aaKnown RBP13.08□□□□□ -0.32
VCAN-211ENST00000513984 OR52H1Q8NGJ2 320 aa13.08□□□□□ -0.32
VCAN-211ENST00000513984 OR6F1Q8NGZ6 308 aa13.08□□□□□ -0.32
VCAN-211ENST00000513984 OR2H1Q9GZK4 316 aa13.08□□□□□ -0.32
VCAN-211ENST00000513984 ATG5Q9H1Y0 275 aa13.08□□□□□ -0.32
VCAN-211ENST00000513984 CALHM2Q9HA72 323 aa13.08□□□□□ -0.32
VCAN-211ENST00000513984 ZFHX2Q9C0A1 2572 aaPredicted RBP13.08□□□□□ -0.32
VCAN-211ENST00000513984 CEP250Q9BV73 2442 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms