RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 COPZ1P61923 177 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 TNFAIP6P98066 277 aaPredicted RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 EFNB1P98172 346 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 COX10Q12887 443 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 MAPK14Q16539 360 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 AANATQ16613 207 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 ODF3L2Q3SX64 289 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC36A2Q495M3 483 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 UNC50Q53HI1 259 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 XKR7Q5GH72 579 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 TEX35Q5T0J7 233 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 THEM4Q5T1C6 240 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 ATAD3BQ5T9A4 648 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 C1orf140Q5VVS0 124 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 METTL11BQ5VVY1 283 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 WDR25Q64LD2 544 aaPredicted RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 WBP2NLQ6ICG8 309 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 TYW3Q6IPR3 259 aaKnown RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 NHLRC1Q6VVB1 395 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 ZNF841Q6ZN19 808 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 RNF165Q6ZSG1 346 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 C16orf62Q7Z3J2 963 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 C6orf120Q7Z4R8 191 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 PATL1Q86TB9 770 aaKnown RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 LCA5Q86VQ0 697 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 COMTD1Q86VU5 262 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 CALHM3Q86XJ0 350 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 VRK2Q86Y07 508 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC22A9Q8IVM8 553 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 SKA3Q8IX90 412 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 C1orf87Q8N0U7 546 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 KDM8Q8N371 416 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC22A24Q8N4F4 322 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 KLHDC1Q8N7A1 406 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 SDR9C7Q8NEX9 313 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 OR8B3Q8NGG8 313 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 OR4C13Q8NGP0 309 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 PNPT1Q8TCS8 783 aaKnown RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 MIPOL1Q8TD10 442 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 KLF14Q8TD94 323 aaPredicted RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 NSMAFQ92636 917 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 TUBGCP3Q96CW5 907 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 RNF183Q96D59 192 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 OTUB1Q96FW1 271 aaPredicted RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 FCRL1Q96LA6 429 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 WDFY2Q96P53 400 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 TSSK3Q96PN8 268 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 OR8B2Q96RD0 313 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 ARHGDIGQ99819 225 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 PCGF1Q9BSM1 259 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 MCRIP2Q9BUT9 160 aaKnown RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 RNF121Q9H920 327 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 KRCC1Q9NPI7 259 aaPredicted RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 MAN2C1Q9NTJ4 1040 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 ATAD3AQ9NVI7 634 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 C1orf109Q9NX04 203 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 ZNRD1Q9P1U0 126 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 B3GAT1Q9P2W7 334 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 WDR45Q9Y484 360 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 CCL27Q9Y4X3 112 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 LSM4Q9Y4Z0 139 aaKnown RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 POLR3HQ9Y535 204 aaPredicted RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 TIMM22Q9Y584 194 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 MAB21L2Q9Y586 359 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 PLECQ15149 4684 aaKnown RBP2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 A0A0A0MQY5 61 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 A0A0U1RQK1 487 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 RBMY1BA6NDE4 496 aaKnown RBP2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 RBMY1EA6NEQ0 496 aaKnown RBP2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ZSCAN5BA6NJL1 495 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 TMEM114B3SHH9 223 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 MS4A18H0YCH9 400 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC28A1O00337 649 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 FBP2O00757 339 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 LSM1O15116 133 aaKnown RBP2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 AHCYL1O43865 530 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 PTP4A3O75365 173 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 AHSA1O95433 338 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 THY1P04216 161 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 DBIP07108 87 aaKnown RBP2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 RBMY1DP0C7P1 496 aaKnown RBP2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 B4GALT1P15291 398 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ARSBP15848 533 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 IL7RP16871 459 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 MYF6P23409 242 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 EEF1B2P24534 225 aaKnown RBP2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 POU1F1P28069 291 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 CHATP28329 748 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 MAGEA12P43365 314 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 PITPNBP48739 271 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ZNF75DP51815 510 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 AQP5P55064 265 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 CDH12P55289 794 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 ZP1P60852 638 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 DR1Q01658 176 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 CAV1Q03135 178 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 EPS8Q12929 822 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 CALCOCO2Q13137 446 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 TAF11Q15544 211 aa2.95□□□□□ -1.94
PDLIM5-218ENST00000513341 KCNJ8Q15842 424 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms