RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ABCD4O14678 606 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 SIAH2O43255 324 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 TBX1O43435 398 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 ZFPL1O95159 310 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 CLDN1O95832 211 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 IGLV3-1P01715 115 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 ISG15P05161 165 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 NR4A1P22736 598 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 RAD52P43351 418 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 SLC3A1Q07837 685 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 SPOCK1Q08629 439 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 SSX1Q16384 188 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 TSTQ16762 297 aaKnown RBP10.81□□□□□ -0.68
PDPN-210ENST00000513143 MEX3BQ6ZN04 569 aaKnown RBP10.81□□□□□ -0.68
PDPN-210ENST00000513143 RFPL4BQ6ZWI9 263 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 PHC2Q8IXK0 858 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 C1orf174Q8IYL3 243 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 OR5AK2Q8NH90 309 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 ABHD4Q8TB40 342 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 UFD1Q92890 307 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 SGK3Q96BR1 496 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 PGLYRP3Q96LB9 341 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 PDCD1LG2Q9BQ51 273 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 BCL2L14Q9BZR8 327 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 STARD10Q9Y365 291 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 SPEF1Q9Y4P9 236 aa10.81□□□□□ -0.68
PDPN-210ENST00000513143 PNMA8CA0A1B0GUJ8 204 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 ATP6V1G2-DDX39BF2Z307 99 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 XRCC2O43543 280 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 GPRIN2O60269 458 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 CD3EP07766 207 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 FAM157BP0CG42 384 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 UBCP0CG48 685 aaKnown RBP10.8□□□□□ -0.68
PDPN-210ENST00000513143 CD53P19397 219 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 TUBG1P23258 451 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 LOXP28300 417 aaPredicted RBP10.8□□□□□ -0.68
PDPN-210ENST00000513143 LIPAP38571 399 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 RPL5P46777 297 aaKnown RBP10.8□□□□□ -0.68
PDPN-210ENST00000513143 PPP1CBP62140 327 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 NKX6-1P78426 367 aaPredicted RBP10.8□□□□□ -0.68
PDPN-210ENST00000513143 DAZAP2Q15038 168 aaPredicted RBP10.8□□□□□ -0.68
PDPN-210ENST00000513143 GLYATL3Q5SZD4 288 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 TMEM244Q5VVB8 128 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 LIPKQ5VXJ0 399 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 TENM4Q6N022 2769 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 ZNF704Q6ZNC4 412 aaPredicted RBP10.8□□□□□ -0.68
PDPN-210ENST00000513143 ZNF676Q8N7Q3 588 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 NUP37Q8NFH4 326 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 OR5L1Q8NGL2 311 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 GHSRQ92847 366 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 SPSB4Q96A44 273 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 RADILQ96JH8 1075 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 LYZL4Q96KX0 146 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 COMMD4Q9H0A8 199 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 RGCCQ9H4X1 137 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 TUBG2Q9NRH3 451 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 ZNF391Q9UJN7 358 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 ICE1Q9Y2F5 2266 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 ZNF281Q9Y2X9 895 aa10.8□□□□□ -0.68
PDPN-210ENST00000513143 SF3B6Q9Y3B4 125 aaKnown RBP10.8□□□□□ -0.68
PDPN-210ENST00000513143 ABCA4P78363 2273 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 PKDREJQ9NTG1 2253 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 A0A1B0GTI1 187 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 SHISA9B4DS77 424 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 P2RY10O00398 339 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 CCRL2O00421 344 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 ATE1O95260 518 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 CCL1P22362 96 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 GABRA5P31644 462 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 GLRXP35754 106 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 ZNF92Q03936 586 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 MALLQ13021 153 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 ODF4Q2M2E3 257 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 SLC22A25Q6T423 547 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 Q6ZSR3 168 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 RDH10Q8IZV5 341 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 PLPP7Q8NBV4 271 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 OR1J1Q8NGS3 322 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 OR13F1Q8NGS4 319 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 OR2AE1Q8NHA4 323 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 OR51E1Q8TCB6 317 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 TMIGD2Q96BF3 282 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 REEP6Q96HR9 211 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 TMEM204Q9BSN7 226 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 REPIN1Q9BWE0 567 aaKnown RBP10.79□□□□□ -0.68
PDPN-210ENST00000513143 OR51B6Q9H340 312 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 POFUT1Q9H488 388 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 GPR84Q9NQS5 396 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 NDUFB11Q9NX14 153 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 KCNN3Q9UGI6 736 aa10.79□□□□□ -0.68
PDPN-210ENST00000513143 A1L4Q6 167 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 H3BSA7 217 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 GOSR1O95249 250 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 ACHEP22303 614 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 CFL1P23528 166 aaKnown RBP10.78□□□□□ -0.68
PDPN-210ENST00000513143 TGFBR2P37173 567 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 ERVS71-1P61550 626 aa10.78□□□□□ -0.68
PDPN-210ENST00000513143 RPS11P62280 158 aaKnown RBP eCLIP10.78□□□□□ -0.68
PDPN-210ENST00000513143 SNTB2Q13425 540 aaKnown RBP10.78□□□□□ -0.68
PDPN-210ENST00000513143 BLMHQ13867 455 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms