RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 CIB3Q96Q77 187 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-210ENST00000512756 HRO43593 1189 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 LRP3O75074 770 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 NKX2-2O95096 273 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 ZGLP1P0C6A0 271 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 TGM1P22735 817 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 UBE2MP61081 183 aaKnown RBP11.28□□□□□ -0.6
COL11A1-210ENST00000512756 RAE1P78406 368 aaKnown RBP11.28□□□□□ -0.6
COL11A1-210ENST00000512756 CPEB3Q8NE35 698 aaKnown RBP11.28□□□□□ -0.6
COL11A1-210ENST00000512756 OR10P1Q8NGE3 313 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 OTOSQ8NHW6 89 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 PP6455Q8WZ26 134 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 SIGLEC7Q9Y286 467 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 URGCP-MRPS24S4R325 110 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 KCNE1BA0A087WTH5 132 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 A0A0B4J2E0 115 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 A0A1B0GX12 115 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 BCL2L11O43521 198 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 CD37P11049 281 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 SRFP11831 508 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 OPRM1P35372 400 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 SHHQ15465 462 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 CCDC71Q8IV32 467 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-210ENST00000512756 SPACA5Q96QH8 159 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 MENTQ9BUN1 341 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 C20orf24Q9BUV8 137 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 PARP12Q9H0J9 701 aaKnown RBP11.28□□□□□ -0.6
COL11A1-210ENST00000512756 ZNF331Q9NQX6 463 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-210ENST00000512756 SIRT5Q9NXA8 310 aa11.28□□□□□ -0.6
COL11A1-210ENST00000512756 WSB2Q9NYS7 404 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-210ENST00000512756 GABRA4P48169 554 aa11.27□□□□□ -0.6
COL11A1-210ENST00000512756 LGALS4P56470 323 aa11.27□□□□□ -0.6
COL11A1-210ENST00000512756 UBE2IP63279 158 aaKnown RBP11.27□□□□□ -0.6
COL11A1-210ENST00000512756 ELFN2Q5R3F8 820 aa11.27□□□□□ -0.6
COL11A1-210ENST00000512756 RPUSD3Q6P087 351 aaKnown RBP11.27□□□□□ -0.6
COL11A1-210ENST00000512756 OR5AS1Q8N127 324 aa11.27□□□□□ -0.6
COL11A1-210ENST00000512756 LAMP3Q9UQV4 416 aa11.27□□□□□ -0.6
COL11A1-210ENST00000512756 TAF1P21675 1872 aa11.27□□□□□ -0.6
COL11A1-210ENST00000512756 TRIM77I1YAP6 450 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 WDR1O75083 606 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 THBS4P35443 961 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 GPR3P46089 330 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 RAG2P55895 527 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 CD300LDQ6UXZ3 194 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 ST8SIA2Q92186 375 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 ACTR3CQ9C0K3 210 aaPredicted RBP11.27□□□□□ -0.61
COL11A1-210ENST00000512756 KLK11Q9UBX7 282 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 SPTY2D1-AS1A0A0U1RR47 76 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 AKR7A2O43488 359 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 CXCL13O43927 109 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 OR2J2O76002 312 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 ADH4P08319 380 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
COL11A1-210ENST00000512756 ENDOGQ14249 297 aaKnown RBP11.27□□□□□ -0.61
COL11A1-210ENST00000512756 TMEM128Q5BJH2 165 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 SPANXN5Q5MJ07 72 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 PXDC1Q5TGL8 231 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 ZNF687Q8N1G0 1237 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 PPP1R1CQ8WVI7 109 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 RTN4IP1Q8WWV3 396 aaPredicted RBP11.27□□□□□ -0.61
COL11A1-210ENST00000512756 RDH5Q92781 318 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 CBR3O75828 277 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 LINC00303Q3SY05 128 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 GLDNQ6ZMI3 551 aaPredicted RBP11.27□□□□□ -0.61
COL11A1-210ENST00000512756 ZDHHC23Q8IYP9 409 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 C8orf44Q96CB5 159 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 DOK1Q99704 481 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 ZNF355PQ9NSJ1 428 aa11.27□□□□□ -0.61
COL11A1-210ENST00000512756 C5orf49A4QMS7 147 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 ARPC3O15145 178 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 PLPP2O43688 288 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 OR10J4P0C629 311 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 ZNF121P58317 390 aaPredicted RBP11.26□□□□□ -0.61
COL11A1-210ENST00000512756 TAS2R45P59539 299 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 DMWDQ09019 674 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 PHYHD1Q5SRE7 291 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 FAM27D1Q5T7N8 215 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 LHX8Q68G74 356 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 THNSL2Q86YJ6 484 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 KDF1Q8NAX2 398 aaPredicted RBP11.26□□□□□ -0.61
COL11A1-210ENST00000512756 ARSGQ96EG1 525 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 OPA3Q9H6K4 179 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 KCNE3Q9Y6H6 103 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 NUP205Q92621 2012 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 DEFA4P12838 97 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 GPR12P47775 334 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 GFERP55789 205 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 SCAND1P57086 179 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 ZBTB37Q5TC79 503 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 CDC20BQ86Y33 519 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 SCCPDHQ8NBX0 429 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 LHX4Q969G2 390 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 CRLF2Q9HC73 371 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 ZNF727A8MUV8 499 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 LMO7DNF2Z398 122 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 DCTN6O00399 190 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 TRAF3IP2O43734 574 aaPredicted RBP11.26□□□□□ -0.61
COL11A1-210ENST00000512756 SSSCA1O60232 199 aa11.26□□□□□ -0.61
COL11A1-210ENST00000512756 PDGFBP01127 241 aaPredicted RBP11.26□□□□□ -0.61
COL11A1-210ENST00000512756 GLI4P10075 376 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms