RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ATP6V1B2P21281 511 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 PMELP40967 661 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 ERFP50548 548 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 RAD23AP54725 363 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 DEFA6Q01524 100 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 MZT1Q08AG7 82 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 TSPAN31Q12999 210 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 MAB21L1Q13394 359 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 DEFB112Q30KQ8 113 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 ZNF770Q6IQ21 691 aaPredicted RBP10.47□□□□□ -0.73
VEGFA-216ENST00000512683 CORO6Q6QEF8 472 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 CYP2R1Q6VVX0 501 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 ZNF620Q6ZNG0 422 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 C17orf107Q6ZR85 190 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 SPATC1Q76KD6 591 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 OR10AD1Q8NGE0 317 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 OR2AJ1Q8NGZ0 328 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 OR4K13Q8NH42 304 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 TBC1D15Q8TC07 691 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 CCT8L2Q96SF2 557 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 DDOQ99489 341 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 IFT27Q9BW83 186 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 NDE1Q9NXR1 346 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 ACTR3BQ9P1U1 418 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 RNF7Q9UBF6 113 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 LYVE1Q9Y5Y7 322 aa10.47□□□□□ -0.73
VEGFA-216ENST00000512683 TCRBV5S2A0A599 114 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 CLPSL1A2RUU4 121 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 FAM181BA6NEQ2 426 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 B2RBV5 119 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 ZNF879B4DU55 563 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 H0YL77 283 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 LGALS8O00214 317 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 TIMM23O14925 209 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 KRT36O76013 467 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 RENP00797 406 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 ACSM4P0C7M7 580 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 MDKP21741 143 aaPredicted RBP10.46□□□□□ -0.73
VEGFA-216ENST00000512683 IFNGR2P38484 337 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 MAGEA2P43356 314 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 CENPAP49450 140 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 TPTEP56180 551 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 FGF12P61328 243 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 MXRA7P84157 204 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 GK2Q14410 553 aaPredicted RBP10.46□□□□□ -0.73
VEGFA-216ENST00000512683 OLFML2AQ68BL7 652 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 CFAP77Q6ZQR2 320 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 PGAP1Q75T13 922 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.46□□□□□ -0.73
VEGFA-216ENST00000512683 PNLDC1Q8NA58 520 aaKnown RBP10.46□□□□□ -0.73
VEGFA-216ENST00000512683 OR4C15Q8NGM1 316 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 GNPDA2Q8TDQ7 276 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 SPRYD4Q8WW59 207 aaPredicted RBP10.46□□□□□ -0.73
VEGFA-216ENST00000512683 SSMEM1Q8WWF3 244 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 SPTSSAQ969W0 71 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 NSL1Q96IY1 281 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 BTBD10Q9BSF8 475 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 TRIM15Q9C019 465 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 FN3KQ9H479 309 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 EGLN3Q9H6Z9 239 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 FN3KRPQ9HA64 309 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 RPRD1BQ9NQG5 326 aaKnown RBP10.46□□□□□ -0.73
VEGFA-216ENST00000512683 CYB5R1Q9UHQ9 305 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 TMCC3Q9ULS5 477 aa10.46□□□□□ -0.73
VEGFA-216ENST00000512683 TRAV38-1A0A0B4J264 116 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 TRAV40A0A0B4J280 105 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 M0QZ24 198 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 BHLHE40O14503 412 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 ZNF205O95201 554 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 LCATP04180 440 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 T-ENOLP0DO92 83 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 GGT2P36268 569 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 MNAT1P51948 309 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 RAG2P55895 527 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 MS4A2Q01362 244 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 CLEC12AQ5QGZ9 265 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 SLC35F1Q5T1Q4 408 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 SLC18B1Q6NT16 456 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 JAZF1Q86VZ6 243 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 SDR9C7Q8NEX9 313 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 OR9Q2Q8NGE9 314 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 OR8D4Q8NGM9 314 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 ZNRF4Q8WWF5 429 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 GATAD2BQ8WXI9 593 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 DYRK2Q92630 601 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 PITX2Q99697 317 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 ATF6BQ99941 703 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 CITED1Q99966 193 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 OPA3Q9H6K4 179 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 PNRC2Q9NPJ4 139 aaKnown RBP10.45□□□□□ -0.74
VEGFA-216ENST00000512683 MRPL22Q9NWU5 206 aaKnown RBP10.45□□□□□ -0.74
VEGFA-216ENST00000512683 VNN3Q9NY84 501 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 IL20Q9NYY1 176 aa10.45□□□□□ -0.74
VEGFA-216ENST00000512683 MRPL15Q9P015 296 aaKnown RBP10.45□□□□□ -0.74
VEGFA-216ENST00000512683 IGHV3OR16-10A0A075B7F0 116 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 A0A0G2JK05 382 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 F5H5K5 113 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 TNFRSF11BO00300 401 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 TOX4O94842 621 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 GASTP01350 101 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms