RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 DOCK9Q9BZ29 2069 aa1.85□□□□□ -2.11
CHD1-207ENST00000511628 IGKV1-27A0A075B6S5 117 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 IGHV1OR15-9A0A0B4J2B8 117 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 IGHV1-69DA0A0B4J2H0 117 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 LOC100653049A0A140TA62 436 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 TMEM223A0PJW6 202 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 SYCE1LA8MT33 242 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 ANKRD65E5RJM6 399 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 H7C0C1 242 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 SLC19A2O60779 497 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 REM1O75628 298 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 KRT34O76011 436 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 YIF1AO95070 293 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 TACSTD2P09758 323 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 RHOXF2BP0C7M4 288 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 POLR2IP36954 125 aaKnown RBP1.84□□□□□ -2.11
CHD1-207ENST00000511628 CFHR2P36980 270 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 RBM34P42696 430 aaKnown RBP1.84□□□□□ -2.11
CHD1-207ENST00000511628 PPICP45877 212 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 RPL23P62829 140 aaKnown RBP1.84□□□□□ -2.11
CHD1-207ENST00000511628 CDK5Q00535 292 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 ZNF33AQ06730 810 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 ART3Q13508 389 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 EIF4EBP1Q13541 118 aaPredicted RBP1.84□□□□□ -2.11
CHD1-207ENST00000511628 MOBPQ13875 183 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 UBE2SQ16763 222 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 CHRFAM7AQ494W8 412 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 FBXW9Q5XUX1 488 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 ANGPTL8Q6UXH0 198 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 SLC16A13Q7RTY0 426 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 MRPL21Q7Z2W9 205 aaKnown RBP1.84□□□□□ -2.11
CHD1-207ENST00000511628 WDFY1Q8IWB7 410 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 LGI3Q8N145 548 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 KIF2BQ8N4N8 673 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 INO80EQ8NBZ0 244 aaPredicted RBP1.84□□□□□ -2.11
CHD1-207ENST00000511628 OR52P1PQ8NH57 321 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 SYNPRQ8TBG9 265 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 FRZBQ92765 325 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 TOP1MTQ969P6 601 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 ISOC2Q96AB3 205 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 DCPSQ96C86 337 aaKnown RBP1.84□□□□□ -2.11
CHD1-207ENST00000511628 C9orf72Q96LT7 481 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 FOPNLQ96NB1 174 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 CSPG4P5Q96PW8 444 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 CAMK2N2Q96S95 79 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 ZNF382Q96SR6 550 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 SCRT1Q9BWW7 348 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 FGF23Q9GZV9 251 aaPredicted RBP1.84□□□□□ -2.11
CHD1-207ENST00000511628 DEFB129Q9H1M3 183 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 FBXO44Q9H4M3 255 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 RGCCQ9H4X1 137 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 CD209Q9NNX6 404 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 HMG20AQ9NP66 347 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 MYOZ1Q9NP98 299 aaPredicted RBP1.84□□□□□ -2.11
CHD1-207ENST00000511628 MED4Q9NPJ6 270 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 DDX19BQ9UMR2 479 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 SAR1BQ9Y6B6 198 aa1.84□□□□□ -2.11
CHD1-207ENST00000511628 ADGRA3Q8IWK6 1321 aa1.84□□□□□ -2.12
CHD1-207ENST00000511628 FHOD3Q2V2M9 1422 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 ARPC4-TTLL3A0A0A6YYG9 625 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 IGHV3OR16-9A0A0B4J2B5 98 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 SLC22A20A6NK97 555 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 PDZK1P1A8MUH7 402 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 SERPINE3A8MV23 424 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 KRBOX1C9JBD0 128 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 H0YJW9 148 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 RBFOX2O43251 390 aaKnown RBP eCLIP1.83□□□□□ -2.12
CHD1-207ENST00000511628 XRCC2O43543 280 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 SLC16A7O60669 478 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 MPDU1O75352 247 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 CCNKO75909 580 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 SEMA3DO95025 777 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 APCSP02743 223 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 CATP04040 527 aaKnown RBP1.83□□□□□ -2.12
CHD1-207ENST00000511628 MRPL3P09001 348 aaKnown RBP1.83□□□□□ -2.12
CHD1-207ENST00000511628 OR56A5P0C7T3 313 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 LINC00869P0C866 280 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 PSMC3P17980 439 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 GABRR2P28476 465 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 PFN2P35080 140 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 MYCNOSP40205 109 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 TAS2R46P59540 309 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 LCN2P80188 198 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 CYP24A1Q07973 514 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 DNAJC3Q13217 504 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 ZNF829Q3KNS6 432 aaPredicted RBP1.83□□□□□ -2.12
CHD1-207ENST00000511628 ABCA11PQ4W5N1 156 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 MPV17L2Q567V2 206 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 NANOGP8Q6NSW7 305 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 WDR82Q6UXN9 313 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 CALHM1Q8IU99 346 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 MYOCDQ8IZQ8 938 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 ZNF645Q8N7E2 425 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 NARS2Q96I59 477 aaKnown RBP1.83□□□□□ -2.12
CHD1-207ENST00000511628 C18orf15Q96N68 181 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 SCGB3A2Q96PL1 93 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 HSD17B10Q99714 261 aaKnown RBP1.83□□□□□ -2.12
CHD1-207ENST00000511628 LZTS2Q9BRK4 669 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 AGMATQ9BSE5 352 aa1.83□□□□□ -2.12
CHD1-207ENST00000511628 TMEM243Q9BU79 118 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms