RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 RPL4P36578 427 aaKnown RBP4.79□□□□□ -1.64
USP53-206ENST00000510737 IER3P46695 156 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 GUCY2DQ02846 1103 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 CD300CQ08708 224 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 NPRL3Q12980 569 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 SLC17A1Q14916 467 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 HFEQ30201 348 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 NSUN5P1Q3KNT7 163 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 HIGD2BQ4VC39 106 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 SYT14P1Q58G82 188 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 SPANXN3Q5MJ09 141 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 CCNJQ5T5M9 372 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 CLEC6AQ6EIG7 209 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 ZFAND6Q6FIF0 208 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 AAED1Q7RTV5 226 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 MDP1Q86V88 176 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 FAM9CQ8IZT9 166 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 NAT8LQ8N9F0 302 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 POMGNT2Q8NAT1 580 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 CHPT1Q8WUD6 406 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 UBTD2Q8WUN7 234 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 SSMEM1Q8WWF3 244 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 TMEM45BQ96B21 275 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 ZNF75AQ96N20 296 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 PATZ1Q9HBE1 687 aaKnown RBP4.79□□□□□ -1.64
USP53-206ENST00000510737 POPDC3Q9HBV1 291 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 CHMP1AQ9HD42 196 aaPredicted RBP4.79□□□□□ -1.64
USP53-206ENST00000510737 FARSBQ9NSD9 589 aaKnown RBP4.79□□□□□ -1.64
USP53-206ENST00000510737 NKIRAS2Q9NYR9 191 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 SENP1Q9P0U3 644 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 TAAR3PQ9P1P4 343 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 SLC9A8Q9Y2E8 581 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 DNAH10Q8IVF4 4471 aa4.79□□□□□ -1.64
USP53-206ENST00000510737 DSPPQ9NZW4 1301 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 A0A1W2PPW3 197 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 A8MXK9 166 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 OR7A17O14581 309 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 UPK3AO75631 287 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 BCKDHAP12694 445 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 IVDP26440 423 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 ARR3P36575 388 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 OR2B6P58173 313 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 BPIFB3P59826 476 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 ATP6V0D1P61421 351 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 ARF1P84077 181 aaKnown RBP4.78□□□□□ -1.64
USP53-206ENST00000510737 EMX1Q04741 257 aaPredicted RBP4.78□□□□□ -1.64
USP53-206ENST00000510737 EGFEM1PQ0D2K5 195 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 BST1Q10588 318 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 SPRNQ5BIV9 151 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.78□□□□□ -1.64
USP53-206ENST00000510737 RNASEH2BQ5TBB1 312 aaKnown RBP4.78□□□□□ -1.64
USP53-206ENST00000510737 C3orf33Q6P1S2 294 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 TMEM154Q6P9G4 183 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 LRRN1Q6UXK5 716 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 GDPGP1Q6ZNW5 385 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 MTERF4Q7Z6M4 381 aaKnown RBP4.78□□□□□ -1.64
USP53-206ENST00000510737 PCYOX1LQ8NBM8 494 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 OR4S1Q8NGB4 309 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 OR5W2Q8NH69 310 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 LRRC39Q96DD0 335 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 ZHX1-C8orf76Q96EF9 292 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 NEURL3Q96EH8 262 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 C16orf58Q96GQ5 468 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 ZNF317Q96PQ6 595 aaPredicted RBP4.78□□□□□ -1.64
USP53-206ENST00000510737 GLIPR2Q9H4G4 154 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 ALG9Q9H6U8 611 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 MED20Q9H944 212 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 SERINC1Q9NRX5 453 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 DDX18Q9NVP1 670 aaKnown RBP4.78□□□□□ -1.64
USP53-206ENST00000510737 DCAF16Q9NXF7 216 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 NDE1Q9NXR1 346 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 B3GNT2Q9NY97 397 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 PRO0461Q9UI25 63 aa4.78□□□□□ -1.64
USP53-206ENST00000510737 ZNF346Q9UL40 294 aaKnown RBP4.78□□□□□ -1.64
USP53-206ENST00000510737 DOCK11Q5JSL3 2073 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 KIR2DS1A0A191URI9 304 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 F5H0A9 414 aaPredicted RBP4.77□□□□□ -1.65
USP53-206ENST00000510737 KRT33AO76009 404 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 IGHV2-70P01814 119 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 KRT14P02533 472 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 WNT2P09544 360 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 UROSP10746 265 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 THRBP10828 461 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 NCBP2P52298 156 aaKnown RBP eCLIP4.77□□□□□ -1.65
USP53-206ENST00000510737 EFNB2P52799 333 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 ZNF763Q0D2J5 394 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 SPA17Q15506 151 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 DUSP5Q16690 384 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 C6orf89Q6UWU4 347 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 FRRS1Q6ZNA5 592 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 GOLGA7Q7Z5G4 137 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 ABHD12BQ7Z5M8 362 aaPredicted RBP4.77□□□□□ -1.65
USP53-206ENST00000510737 LRRC28Q86X40 367 aaPredicted RBP4.77□□□□□ -1.65
USP53-206ENST00000510737 MOSPD2Q8NHP6 518 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 KIF18AQ8NI77 898 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 STAG3L4Q8TBR4 150 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 THUMPD3Q9BV44 507 aaKnown RBP4.77□□□□□ -1.65
USP53-206ENST00000510737 FNDC11Q9BVV2 318 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 SHCBP1LQ9BZQ2 653 aa4.77□□□□□ -1.65
USP53-206ENST00000510737 OR11A1Q9GZK7 315 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms