RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 GLYATL3Q5SZD4 288 aa12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 PRAMEF6Q5VXH4 476 aa12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 LRRC28Q86X40 367 aaPredicted RBP12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 ERI1Q8IV48 349 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 AQP12AQ8IXF9 295 aa12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 C19orf18Q8NEA5 215 aa12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 OR6N2Q8NGY6 317 aa12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 POP5Q969H6 163 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 C7orf69Q9H7B7 122 aa12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 PATZ1Q9HBE1 687 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 CMC2Q9NRP2 79 aa12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 DDX28Q9NUL7 540 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 UFSP2Q9NUQ7 469 aa12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 GGT3PA6NGU5 568 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 TBX1O43435 398 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 FOXH1O75593 365 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 VENTXO95231 258 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 EPHA1P21709 976 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 PRKACGP22612 351 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 GRK5P34947 590 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 MDH2P40926 338 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 SLC25A1P53007 311 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 CBX1P83916 185 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 HOXA4Q00056 320 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 GINS1Q14691 196 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 OR8G1Q15617 311 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 TMEM155Q4W5P6 130 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 C22orf15Q8WYQ4 148 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 SLC7A6OSQ96CW6 309 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 ADAT1Q9BUB4 502 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 OR51V1Q9H2C8 321 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 MMP26Q9NRE1 261 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 FAM53CQ9NYF3 392 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 DNAJC27Q9NZQ0 273 aa12.44□□□□□ -0.42
UBE2D3-228ENST00000508974 CD300LBA8K4G0 201 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 CEACAM18A8MTB9 384 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 ZNF878C9JN71 531 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 J3QLI3 93 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 FKBP6O75344 327 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 ANXA2P07355 339 aaKnown RBP12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 RPS2P15880 293 aaKnown RBP12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 HSD11B1P28845 292 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 PMELP40967 661 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 RAD23AP54725 363 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 MAB21L1Q13394 359 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 MPPED2Q15777 294 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 GFOD2Q3B7J2 385 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 LINC01590Q5TEZ4 76 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 PLBD1Q6P4A8 553 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 DRAM2Q6UX65 266 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 CD300LDQ6UXZ3 194 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 DPY19L4Q7Z388 723 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 C1QL2Q7Z5L3 287 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 BOLLQ8N9W6 283 aaKnown RBP12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 ZMYND19Q96E35 227 aaPredicted RBP12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 INTS14Q96SY0 518 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 AMELYQ99218 206 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 KCNJ15Q99712 375 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 ZNF556Q9HAH1 456 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 BRD7Q9NPI1 651 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 OPN4Q9UHM6 478 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 POMPQ9Y244 141 aa12.43□□□□□ -0.42
UBE2D3-228ENST00000508974 ARRDC5A6NEK1 342 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 LRRC30A6NM36 301 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 TRAPPC2LH3BP13 241 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 FAM20BO75063 409 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 DNAJC8O75937 253 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 IRF2P14316 349 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 PAICSP22234 425 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 GSTT1P30711 240 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 OTX1P32242 354 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 CX3CR1P49238 355 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 PCK2Q16822 640 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 KLHL12Q53G59 568 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 ESCO2Q56NI9 601 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 TMEM236Q5W0B7 351 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 MUC20Q8N307 709 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 NANPQ8TBE9 248 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 ZNF418Q8TF45 676 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 SLC6A7Q99884 636 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 FBN3Q75N90 2809 aa12.42□□□□□ -0.42
UBE2D3-228ENST00000508974 PPIAL4EA0A075B759 164 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 PRR23D1E9PI22 279 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 F5H0A9 414 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 PPIAL4DF5H284 164 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 IFNL4K9M1U5 179 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 SELENOFO60613 162 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 TIPRLO75663 272 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 GLCEO94923 617 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 PRR23D2P0DMB1 279 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 PPIAL4FP0DN26 164 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 GATA3P23771 443 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 CD200P41217 278 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 BLVRAP53004 296 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 SCGB2A2Q13296 93 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 GK3PQ14409 553 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 TEX30Q5JUR7 227 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 DEFB108BQ8NET1 73 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 OR56B2PQ8NGI1 322 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms