RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 UPRTQ96BW1 309 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 NEIL1Q96FI4 390 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 DUX5Q96PT3 197 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 TRIM15Q9C019 465 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 NDE1Q9NXR1 346 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 ARL2BPQ9Y2Y0 163 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 IGHV3OR16-10A0A075B7F0 116 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 TRAV40A0A0B4J280 105 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 TCRBV5S2A0A599 114 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 CD300LBA8K4G0 201 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 TNFRSF11BO00300 401 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 PTBP3O95758 552 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 PLATP00750 562 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 HKR1P10072 659 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 ZNF823P16415 610 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 GYS2P54840 703 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 BTNL3Q6UXE8 466 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 LRRN1Q6UXK5 716 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 RASSF6Q6ZTQ3 369 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 C9orf139Q6ZV77 190 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 NLRC3Q7RTR2 1065 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 MRPL21Q7Z2W9 205 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 PIGWQ7Z7B1 504 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 LNX2Q8N448 690 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 SLC37A3Q8NCC5 494 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 C19orf18Q8NEA5 215 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 OR8B3Q8NGG8 313 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 OR51L1Q8NGJ5 315 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 OR9Q1Q8NGQ5 310 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 OR2T4Q8NH00 348 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 SPRYD4Q8WW59 207 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 SPTSSAQ969W0 71 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 ERGIC1Q969X5 290 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 PLEKHA8Q96JA3 519 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 OR8B2Q96RD0 313 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 ZMAT3Q9HA38 289 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 UFSP2Q9NUQ7 469 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 TBC1D23Q9NUY8 699 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 VNN3Q9NY84 501 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 ACTR3BQ9P1U1 418 aa10.85□□□□□ -0.67
HMGCS1-205ENST00000508319 PHYHO14832 338 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 SPRY1O43609 319 aaPredicted RBP10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 DCTN3O75935 186 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 GASTP01350 101 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 RNASE1P07998 156 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 IRF2P14316 349 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 CA6P23280 308 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 PSMB10P40306 273 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 GNGT1P63211 74 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 MXRA7P84157 204 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 CRMP1Q14194 572 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 OR8G1Q15617 311 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 PCK2Q16822 640 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 GLYATL3Q5SZD4 288 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 WDR25Q64LD2 544 aaPredicted RBP10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 DRAM2Q6UX65 266 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 LYPD2Q6UXB3 125 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 ZNF841Q6ZN19 808 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 DCDC5Q6ZRR9 648 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 DCXRQ7Z4W1 244 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 LINC00471Q8N535 108 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 FITM2Q8N6M3 262 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 AQP11Q8NBQ7 271 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 OR11L1Q8NGX0 322 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 SGMS2Q8NHU3 365 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 RAB40AQ8WXH6 277 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 NUDT16L1Q9BRJ7 211 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 ADAT1Q9BUB4 502 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 NMNAT2Q9BZQ4 307 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 MS4A7Q9GZW8 240 aaPredicted RBP10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 SLC22A4Q9H015 551 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 CLN8Q9UBY8 286 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 PCDHGB1Q9Y5G3 927 aa10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 SOX21Q9Y651 276 aaPredicted RBP10.84□□□□□ -0.67
HMGCS1-205ENST00000508319 KIR2DS1A0A191URI9 304 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 C22orf46C9J442 243 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 CLDN34H7C241 214 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 CCNB2O95067 398 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 SOX14O95416 240 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 GYPBP06028 91 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 SPARCP09486 303 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 SPI1P17947 270 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 ENTPD1P49961 510 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 PPP1R8Q12972 351 aaKnown RBP10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 BAMBIQ13145 260 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 LCN8Q6JVE9 175 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 ZNF511Q8NB15 262 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 OR4Q3Q8NH05 313 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 SLAMF6Q96DU3 332 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 COPS4Q9BT78 406 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 TSSK6Q9BXA6 273 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 FN3KRPQ9HA64 309 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 ARMC1Q9NVT9 282 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 MRPL15Q9P015 296 aaKnown RBP10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 RNF7Q9UBF6 113 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 CTSZQ9UBR2 303 aa10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 NOP16Q9Y3C1 178 aaKnown RBP10.83□□□□□ -0.68
HMGCS1-205ENST00000508319 MDFIC2A0A1B0GVS7 189 aa10.82□□□□□ -0.68
HMGCS1-205ENST00000508319 GMDSO60547 372 aa10.82□□□□□ -0.68
HMGCS1-205ENST00000508319 CLUP10909 449 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms