RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SLC46A2Q9BY10 475 aa9.69□□□□□ -0.86
PDLIM5-210ENST00000508216 RAB1BQ9H0U4 201 aa9.69□□□□□ -0.86
PDLIM5-210ENST00000508216 ALG9Q9H6U8 611 aa9.69□□□□□ -0.86
PDLIM5-210ENST00000508216 ACER3Q9NUN7 267 aa9.69□□□□□ -0.86
PDLIM5-210ENST00000508216 ANKRD36A6QL64 1941 aa9.69□□□□□ -0.86
PDLIM5-210ENST00000508216 RNASET2O00584 256 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 KITLGP21583 273 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 XCR1P46094 333 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 CACNG1Q06432 222 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 BAXQ07812 192 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 IFI44LQ53G44 452 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 DCST1Q5T197 706 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 NBPF12Q5TAG4 269 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 TMEM205Q6UW68 189 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 RBM45Q8IUH3 476 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 C4orf19Q8IY42 314 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 TOP6BLQ8N6T0 577 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 OR4X1Q8NH49 305 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 GPX8Q8TED1 209 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 RNF133Q8WVZ7 376 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 SPRYD4Q8WW59 207 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 SLC25A38Q96DW6 304 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 RSPRY1Q96DX4 576 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 ZNF764Q96H86 408 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 FAM46AQ96IP4 442 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 PTPN18Q99952 460 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 ZNF649Q9BS31 505 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 DPY30Q9C005 99 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 KATNBL1Q9H079 304 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 SGK2Q9HBY8 427 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 MMP25Q9NPA2 562 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 G6PC2Q9NQR9 355 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 CORO2BQ9UQ03 480 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 FUT9Q9Y231 359 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 ARL5AQ9Y689 179 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 A0A1W2PRS3 328 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 LCE2BO14633 110 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 HNRNPDLO14979 420 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 AGPAT2O15120 278 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 ARPC3O15145 178 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 PPP1R3DO95685 299 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 CD160O95971 181 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 ALPPL2P10696 532 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 PPIBP23284 216 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 FLT3LGP49771 235 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 RIPPLY3P57055 190 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 CKS1BP61024 79 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 TBPL1P62380 186 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 HERV-K104P63124 156 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 FAM3AP98173 230 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 ID2Q02363 134 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 ACOT6Q3I5F7 207 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 LRRC10Q5BKY1 277 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 SOHLH1Q5JUK2 328 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 SPANXN4Q5MJ08 99 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 CCDC144NLQ6NUI1 221 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 APOBEC3FQ8IUX4 373 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 OR4K1Q8NGD4 311 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 OR10Q1Q8NGQ4 319 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 OR5B3Q8NH48 314 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 OR5AK3PQ8NH89 298 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 TMEM170AQ8WVE7 144 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 AUTS2Q8WXX7 1259 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 RAX2Q96IS3 184 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 PRRC1Q96M27 445 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 GNRHR2Q96P88 292 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 TBX15Q96SF7 602 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 C20orf24Q9BUV8 137 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 RERGLQ9H628 205 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 MTHFD2LQ9H903 347 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 RDH14Q9HBH5 336 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 SIRT3Q9NTG7 399 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 PADI3Q9ULW8 664 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 CCL27Q9Y4X3 112 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 OR51B2Q9Y5P1 312 aa9.68□□□□□ -0.86
PDLIM5-210ENST00000508216 TRAV8-7A0A075B6U6 113 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 A4D1N5 150 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 CD8B2A6NJW9 211 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 HIDE1A8MVS5 230 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 PSMD10O75832 226 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 GPANK1O95872 356 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 CTSLP07711 333 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 OR8U9P0C7N5 309 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 C1QTNF9P0C862 333 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 ARAFP10398 606 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 CELP19835 753 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 UCP1P25874 307 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 PSMB5P28074 263 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 GCH1P30793 250 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 CRYBA2P53672 197 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 RAB38P57729 211 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 CYCSP99999 105 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 CDK3Q00526 305 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 SQSTM1Q13501 440 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 TSTA3Q13630 321 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 RGNQ15493 299 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 CEBPEQ15744 281 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 BATFQ16520 125 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 CRB2Q5IJ48 1285 aa9.67□□□□□ -0.86
PDLIM5-210ENST00000508216 HECTD2Q5U5R9 776 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms