RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 ATP6V1E1P36543 226 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 MDH1P40925 334 aaKnown RBP0.12□□□□□ -2.39
CLOCK-207ENST00000508049 MAGEA6P43360 314 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 MAGEA8P43361 318 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 OR12D2P58182 307 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 MRPS22P82650 360 aaKnown RBP0.12□□□□□ -2.39
CLOCK-207ENST00000508049 TSC22D1Q15714 1073 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 ORMDL3Q8N138 153 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 CCDC110Q8TBZ0 833 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 YIPF5Q969M3 257 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 TMEM230Q96A57 120 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 SLC25A44Q96H78 314 aaPredicted RBP0.12□□□□□ -2.39
CLOCK-207ENST00000508049 TCEANC2Q96MN5 208 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 THUMPD2Q9BTF0 503 aaKnown RBP0.12□□□□□ -2.39
CLOCK-207ENST00000508049 TTTY12Q9BZ98 90 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 NUP50Q9UKX7 468 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 PEX16Q9Y5Y5 336 aa0.12□□□□□ -2.39
CLOCK-207ENST00000508049 A0A1W2PPV9 198 aa0.11□□□□□ -2.39
CLOCK-207ENST00000508049 IDH1O75874 414 aaKnown RBP0.11□□□□□ -2.39
CLOCK-207ENST00000508049 U2AF2P26368 475 aaKnown RBP eCLIP0.11□□□□□ -2.39
CLOCK-207ENST00000508049 MAPK3P27361 379 aaPredicted RBP0.11□□□□□ -2.39
CLOCK-207ENST00000508049 IFNA8P32881 189 aa0.11□□□□□ -2.39
CLOCK-207ENST00000508049 PRPHP41219 470 aa0.11□□□□□ -2.39
CLOCK-207ENST00000508049 SSR1P43307 286 aaKnown RBP0.11□□□□□ -2.39
CLOCK-207ENST00000508049 ZNF678Q5SXM1 525 aa0.11□□□□□ -2.39
CLOCK-207ENST00000508049 C9orf135Q5VTT2 229 aa0.11□□□□□ -2.39
CLOCK-207ENST00000508049 Q6ZPB1 254 aaPredicted RBP0.11□□□□□ -2.39
CLOCK-207ENST00000508049 FA2HQ7L5A8 372 aa0.11□□□□□ -2.39
CLOCK-207ENST00000508049 B3GNT7Q8NFL0 401 aa0.11□□□□□ -2.39
CLOCK-207ENST00000508049 OR4K13Q8NH42 304 aa0.11□□□□□ -2.39
CLOCK-207ENST00000508049 RBPMSQ93062 196 aaKnown RBP0.11□□□□□ -2.39
CLOCK-207ENST00000508049 COQ2Q96H96 371 aa0.11□□□□□ -2.39
CLOCK-207ENST00000508049 CLN8Q9UBY8 286 aa0.11□□□□□ -2.39
CLOCK-207ENST00000508049 BRCA1P38398 1863 aaKnown RBP0.11□□□□□ -2.39
CLOCK-207ENST00000508049 MICAL3Q7RTP6 2002 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 IGKV1-27A0A075B6S5 117 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 IZUMO1RA6ND01 250 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 G3V3Q6 166 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 MAS1P04201 325 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 TAS2R46P59540 309 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 FGL1Q08830 312 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 LGALSLQ3ZCW2 172 aaPredicted RBP0.1□□□□□ -2.39
CLOCK-207ENST00000508049 FAM104BQ5XKR9 115 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 BBS7Q8IWZ6 715 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 OR8K3Q8NH51 312 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 CCDC47Q96A33 483 aaKnown RBP0.1□□□□□ -2.39
CLOCK-207ENST00000508049 TPPP3Q9BW30 176 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 OR2S2Q9NQN1 319 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 ETNK2Q9NVF9 386 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.1□□□□□ -2.39
CLOCK-207ENST00000508049 ADAMTS7Q9UKP4 1686 aa0.1□□□□□ -2.39
CLOCK-207ENST00000508049 BAZ1BQ9UIG0 1483 aaKnown RBP0.1□□□□□ -2.39
CLOCK-207ENST00000508049 CLPXO76031 633 aa0.09□□□□□ -2.4
CLOCK-207ENST00000508049 DBTP11182 482 aaKnown RBP0.09□□□□□ -2.4
CLOCK-207ENST00000508049 KRT13P13646 458 aa0.09□□□□□ -2.4
CLOCK-207ENST00000508049 ZNF726P1Q15940 193 aa0.09□□□□□ -2.4
CLOCK-207ENST00000508049 EXOC3L2Q2M3D2 409 aa0.09□□□□□ -2.4
CLOCK-207ENST00000508049 MRPL55Q7Z7F7 128 aaKnown RBP0.09□□□□□ -2.4
CLOCK-207ENST00000508049 TMEM150AQ86TG1 271 aa0.09□□□□□ -2.4
CLOCK-207ENST00000508049 MS4A15Q8N5U1 240 aa0.09□□□□□ -2.4
CLOCK-207ENST00000508049 SLC7A13Q8TCU3 470 aa0.09□□□□□ -2.4
CLOCK-207ENST00000508049 OR5B12Q96R08 314 aa0.09□□□□□ -2.4
CLOCK-207ENST00000508049 LSM7Q9UK45 103 aaKnown RBP0.09□□□□□ -2.4
CLOCK-207ENST00000508049 PTBP2Q9UKA9 531 aaKnown RBP0.09□□□□□ -2.4
CLOCK-207ENST00000508049 ATP8B3O60423 1300 aa0.09□□□□□ -2.4
CLOCK-207ENST00000508049 TRAV26-1A0A087WT03 109 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 A0A1B0GVL5 298 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 ISPDA4D126 451 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 PDZK1P1A8MUH7 402 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 CTAG2O75638 210 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 CDH6P55285 790 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 ZNF266Q14584 549 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 CCDC184Q52MB2 194 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 HSP90AA5PQ58FG0 334 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 UBE2UQ5VVX9 321 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 SNX31Q8N9S9 440 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 OR4D6Q8NGJ1 314 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 ACTR3BQ9P1U1 418 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 SH3BGRL2Q9UJC5 107 aa0.08□□□□□ -2.4
CLOCK-207ENST00000508049 IGKV1OR2-108A0A075B7D4 117 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 LY6LH3BQJ8 138 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 KLHL41O60662 606 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 ENTPD6O75354 484 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 TMEM50AO95807 157 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 IQCF3P0C7M6 154 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 KCNJ2P63252 427 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 NADK2Q4G0N4 442 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 RIPPLY2Q5TAB7 128 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 OPN5Q6U736 354 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 ZNF619Q8N2I2 560 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 SLC25A29Q8N8R3 303 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 OR1L6Q8NGR2 347 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 ZNF563Q8TA94 476 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 RLN3Q8WXF3 142 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 CACNG8Q8WXS5 425 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 KCNS1Q96KK3 526 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 OR4K3Q96R72 315 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 ADGRB3O60242 1522 aa0.07□□□□□ -2.4
CLOCK-207ENST00000508049 NUP205Q92621 2012 aa0.06□□□□□ -2.4
CLOCK-207ENST00000508049 A0A1B0GWJ7 208 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms