RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 EFCAB9A8MZ26 197 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 H3BN98 237 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 CTDSPLO15194 276 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 CHP2O43745 196 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 FADS1O60427 444 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 TPST2O60704 377 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 GATBO75879 557 aaKnown RBP6.27□□□□□ -1.41
CLCN3-206ENST00000507875 SOX14O95416 240 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 ADORA3P0DMS8 318 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 PNMTP11086 282 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 FKBP2P26885 142 aaKnown RBP6.27□□□□□ -1.41
CLCN3-206ENST00000507875 SERPINB10P48595 397 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 MAPK14Q16539 360 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 ENTPD8Q5MY95 495 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 PDZK1Q5T2W1 519 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 C12orf73Q69YU5 71 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 RPL13AP3Q6NVV1 102 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 ULK3Q6PHR2 472 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 ABHD12BQ7Z5M8 362 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-206ENST00000507875 MARCH9Q86YJ5 346 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 RPL3LQ92901 407 aaKnown RBP6.27□□□□□ -1.41
CLCN3-206ENST00000507875 SLC41A3Q96GZ6 507 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 Q96MT0 163 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 KLHDC3Q9BQ90 382 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 RAB1BQ9H0U4 201 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 FN3KRPQ9HA64 309 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 SLC25A19Q9HC21 320 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 TRIM36Q9NQ86 728 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 FOXJ2Q9P0K8 574 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 RPS6KB2Q9UBS0 482 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 FBXL3Q9UKT7 428 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 FREM2Q5SZK8 3169 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 USP24Q9UPU5 2620 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 A0A1W2PNU3 283 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-206ENST00000507875 FABP12A6NFH5 140 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 CLDN25C9JDP6 229 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 J3QRK9 145 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 VCYO14598 125 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 AIREO43918 545 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 PTHP01270 115 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 KRT8P05787 483 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 PIPP12273 146 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-206ENST00000507875 PGCP20142 388 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 OPRL1P41146 370 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 TMPRSS3P57727 454 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 COPZ1P61923 177 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 FAM199XQ6PEV8 388 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-206ENST00000507875 CASP12Q6UXS9 341 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 MBOAT2Q6ZWT7 520 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 WDR53Q7Z5U6 358 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-206ENST00000507875 CLIP4Q8N3C7 705 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 GALNT16Q8N428 558 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 OR4N2Q8NGD1 307 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 OR4K5Q8NGD3 323 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 C9orf43Q8TAL5 461 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-206ENST00000507875 PIGXQ8TBF5 258 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 GPX8Q8TED1 209 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 NEU4Q8WWR8 484 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-206ENST00000507875 NTNG2Q96CW9 530 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ZG16BQ96DA0 208 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 IL4I1Q96RQ9 567 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 IFT27Q9BW83 186 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 TMEM185BQ9H7F4 350 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ZNF160Q9HCG1 818 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ERRFI1Q9UJM3 462 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-206ENST00000507875 AKAP13Q12802 2813 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 TRGV11A0A075B6L2 103 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 A0A1B0GUH1 482 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 C5orf52A6NGY3 159 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 TMEM200CA6NKL6 621 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 F8W036 122 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ARPC3O15145 178 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 CDC40O60508 579 aaKnown RBP eCLIP6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ENTPD6O75354 484 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ZNF12P17014 697 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 SRD5A1P18405 259 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 RCVRNP35243 200 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 UGT2B10P36537 528 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 EIF2S3P41091 472 aaKnown RBP6.26□□□□□ -1.41
CLCN3-206ENST00000507875 P2RX1P51575 399 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ATP5IP56385 69 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-206ENST00000507875 CTBP2P56545 445 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 CLDN6P56747 220 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 SKP2Q13309 424 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ZNF846Q147U1 533 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 OR1Q1Q15612 314 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ABHD17BQ5VST6 288 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 UQCC3Q6UW78 93 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 Q6ZNX1 250 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 SHISA6Q6ZSJ9 500 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ZNF367Q7RTV3 350 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 GDF7Q7Z4P5 450 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 IGFN1Q86VF2 1251 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 FOXRED2Q8IWF2 684 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 CYP4Z2PQ8N1L4 340 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 LHFPL5Q8TAF8 219 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 S100ZQ8WXG8 99 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 TMEM234Q8WY98 164 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ORAI1Q96D31 301 aa6.26□□□□□ -1.41
CLCN3-206ENST00000507875 ZHX1-C8orf76Q96EF9 292 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms