RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 TMEM91Q6ZNR0 172 aa15.13■□□□□ 0.01
RNF4-209ENST00000507784 GDPGP1Q6ZNW5 385 aa15.13■□□□□ 0.01
RNF4-209ENST00000507784 ZNF808Q8N4W9 903 aaPredicted RBP15.13■□□□□ 0.01
RNF4-209ENST00000507784 OR52H1Q8NGJ2 320 aa15.13■□□□□ 0.01
RNF4-209ENST00000507784 OR13C3Q8NGS6 347 aa15.13■□□□□ 0.01
RNF4-209ENST00000507784 SGK3Q96BR1 496 aa15.13■□□□□ 0.01
RNF4-209ENST00000507784 TRMT61AQ96FX7 289 aaKnown RBP15.13■□□□□ 0.01
RNF4-209ENST00000507784 FAM71F1Q96KD3 344 aaPredicted RBP15.13■□□□□ 0.01
RNF4-209ENST00000507784 OR14A2Q96R54 314 aa15.13■□□□□ 0.01
RNF4-209ENST00000507784 MED18Q9BUE0 208 aa15.13■□□□□ 0.01
RNF4-209ENST00000507784 C1QTNF5Q9BXJ0 243 aa15.13■□□□□ 0.01
RNF4-209ENST00000507784 GPR84Q9NQS5 396 aa15.13■□□□□ 0.01
RNF4-209ENST00000507784 CRNNQ9UBG3 495 aaPredicted RBP15.13■□□□□ 0.01
RNF4-209ENST00000507784 DHDHQ9UQ10 334 aa15.13■□□□□ 0.01
RNF4-209ENST00000507784 ZNF879B4DU55 563 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 IGLV1-44P01699 117 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 ISG15P05161 165 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 TGFBR1P36897 503 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 NCS1P62166 190 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 RPS11P62280 158 aaKnown RBP eCLIP15.12■□□□□ 0.01
RNF4-209ENST00000507784 MALLQ13021 153 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 CTF1Q16619 201 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 Q499Y3 187 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 GLYATL3Q5SZD4 288 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 C1QTNF12Q5T7M4 302 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 PAMR1Q6UXH9 720 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 C22orf34Q6ZV56 151 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 FAM169BQ8N8A8 192 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 OR51A4Q8NGJ6 313 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 OR2AE1Q8NHA4 323 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 ITLN2Q8WWU7 325 aaPredicted RBP15.12■□□□□ 0.01
RNF4-209ENST00000507784 APOBEC3DQ96AK3 386 aaPredicted RBP15.12■□□□□ 0.01
RNF4-209ENST00000507784 WFIKKN1Q96NZ8 548 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 KCNS3Q9BQ31 491 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 PTTG3PQ9NZH4 202 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 NDRG3Q9UGV2 375 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 STARD10Q9Y365 291 aa15.12■□□□□ 0.01
RNF4-209ENST00000507784 A0A1B0GTI1 187 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 H3BMQ9 156 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 GATBO75879 557 aaKnown RBP15.11■□□□□ 0.01
RNF4-209ENST00000507784 NGFP01138 241 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 FAM157BP0CG42 384 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 GRNP28799 593 aaKnown RBP15.11■□□□□ 0.01
RNF4-209ENST00000507784 WNT5AP41221 380 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 SERPINB10P48595 397 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 ZMAT1Q5H9K5 638 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 CD200R1LQ6Q8B3 271 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 UNQ9370/PRO34162Q6UXP9 181 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 DOK3Q7L591 496 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 OR5L1Q8NGL2 311 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 LINC01560Q8TB33 94 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 REEP6Q96HR9 211 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 LYZL4Q96KX0 146 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 BCL7BQ9BQE9 202 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 SOX7Q9BT81 388 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 NPAP1Q9NZP6 1156 aa15.11■□□□□ 0.01
RNF4-209ENST00000507784 TRBV5-5A0A0J9YX44 114 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 A0A0U1RQV5 110 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 XRCC2O43543 280 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 LMX1BO60663 402 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 THBDP07204 575 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 AGAP20933 346 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 GALP22466 123 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 MAPK3P27361 379 aaPredicted RBP15.1■□□□□ 0.01
RNF4-209ENST00000507784 FGF9P31371 208 aaPredicted RBP15.1■□□□□ 0.01
RNF4-209ENST00000507784 C3orf36Q3SXR2 165 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 COLCA1Q6ZS62 124 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 SSX8Q7RTT4 187 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 AKAP1Q92667 903 aaKnown RBP eCLIP15.1■□□□□ 0.01
RNF4-209ENST00000507784 KCTD7Q96MP8 289 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 NOX4Q9NPH5 578 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 TBCCD1Q9NVR7 557 aa15.1■□□□□ 0.01
RNF4-209ENST00000507784 RTTNQ86VV8 2226 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 IGHV2OR16-5A0A0B4J2B6 119 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 ZNF701M0R085 212 aaPredicted RBP15.09■□□□□ 0.01
RNF4-209ENST00000507784 MTRF1O75570 445 aaKnown RBP15.09■□□□□ 0.01
RNF4-209ENST00000507784 ZNF12P17014 697 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 ZNF20P17024 532 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 MYL9P24844 172 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 CALRP27797 417 aaKnown RBP15.09■□□□□ 0.01
RNF4-209ENST00000507784 CALCRP30988 508 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 NAAAQ02083 359 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 SPCS2Q15005 226 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 HSD17B12Q53GQ0 312 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 FAM27D1Q5T7N8 215 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 MRPL21Q7Z2W9 205 aaKnown RBP15.09■□□□□ 0.01
RNF4-209ENST00000507784 KBTBD8Q8NFY9 601 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 OR1J1Q8NGS3 322 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 NDNFQ8TB73 568 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 FGGYQ96C11 551 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 ORAI1Q96D31 301 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 RADILQ96JH8 1075 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 POFUT1Q9H488 388 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 HEATR1Q9H583 2144 aaKnown RBP15.09■□□□□ 0.01
RNF4-209ENST00000507784 NGBQ9NPG2 151 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 DIDO1Q9BTC0 2240 aaKnown RBP15.09■□□□□ 0.01
RNF4-209ENST00000507784 HCFC1P51610 2035 aa15.09■□□□□ 0.01
RNF4-209ENST00000507784 ANKRD61A6NGH8 418 aa15.08■□□□□ 0
RNF4-209ENST00000507784 A6NIN4 97 aa15.08■□□□□ 0
RNF4-209ENST00000507784 SLC22A1O15245 554 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms