RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 IL19Q9UHD0 177 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 IGHV4-61A0A0C4DH41 118 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 TBX1O43435 398 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 PPIHO43447 177 aaKnown RBP14.17□□□□□ -0.14
SNCA-209ENST00000506244 CDC14BO60729 498 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 SLC2A1P11166 492 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 COL8A2P25067 703 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 POLR2IP36954 125 aaKnown RBP14.17□□□□□ -0.14
SNCA-209ENST00000506244 SRP9P49458 86 aaKnown RBP14.17□□□□□ -0.14
SNCA-209ENST00000506244 RIPPLY3P57055 190 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 ZNF121P58317 390 aaPredicted RBP14.17□□□□□ -0.14
SNCA-209ENST00000506244 PSMA6P60900 246 aaKnown RBP14.17□□□□□ -0.14
SNCA-209ENST00000506244 TMED1Q13445 227 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 TIGD6Q17RP2 521 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 GLYATL3Q5SZD4 288 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 DEGS2Q6QHC5 323 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 HPS1Q92902 700 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 AMELYQ99218 206 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 SLC30A2Q9BRI3 323 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 MROQ9BYG7 248 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 RGCCQ9H4X1 137 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 C8orf4Q9NR00 106 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 DNAJC27Q9NZQ0 273 aa14.17□□□□□ -0.14
SNCA-209ENST00000506244 GGT3PA6NGU5 568 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 IFNL4K9M1U5 179 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 ZNF254O75437 659 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 HTR1FP30939 366 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 ZNF92Q03936 586 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 SNCBQ16143 134 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 LRRN1Q6UXK5 716 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 Q6ZR03 302 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 PEG10Q86TG7 708 aaKnown RBP14.16□□□□□ -0.14
SNCA-209ENST00000506244 SLC35F2Q8IXU6 374 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 OR2AE1Q8NHA4 323 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 SPSB4Q96A44 273 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 PGAM5Q96HS1 289 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 RDH12Q96NR8 316 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 OR2V2Q96R30 315 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 REPIN1Q9BWE0 567 aaKnown RBP14.16□□□□□ -0.14
SNCA-209ENST00000506244 ADGRL4Q9HBW9 690 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 TMEM100Q9NV29 134 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 ZNF391Q9UJN7 358 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.16□□□□□ -0.14
SNCA-209ENST00000506244 KLHDC2Q9Y2U9 406 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 LRP12Q9Y561 859 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 N6AMT1Q9Y5N5 214 aa14.16□□□□□ -0.14
SNCA-209ENST00000506244 CSPG4Q6UVK1 2322 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 HIVEP2P31629 2446 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 TLN2Q9Y4G6 2542 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 SNTNA6NMZ2 147 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 CD300LBA8K4G0 201 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 ZNF670-ZNF695F2Z2N8 137 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 DDOSTP39656 456 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 ROM1Q03395 351 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 KRTAP1-1Q07627 177 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 ZNF829Q3KNS6 432 aaPredicted RBP14.15□□□□□ -0.14
SNCA-209ENST00000506244 ZIK1Q3SY52 487 aaPredicted RBP14.15□□□□□ -0.14
SNCA-209ENST00000506244 MEDAGQ5VYS4 303 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 CYB5R2Q6BCY4 276 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 Q71RC1 249 aaPredicted RBP14.15□□□□□ -0.14
SNCA-209ENST00000506244 FAM57BQ71RH2 274 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 BCDIN3DQ7Z5W3 292 aaKnown RBP14.15□□□□□ -0.14
SNCA-209ENST00000506244 ZNF679Q8IYX0 411 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 FTMTQ8N4E7 242 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 OR10AD1Q8NGE0 317 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 CCL17Q92583 94 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 RAB1CQ92928 201 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 REEP6Q96HR9 211 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 CLN6Q9NWW5 311 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 MRPL15Q9P015 296 aaKnown RBP14.15□□□□□ -0.14
SNCA-209ENST00000506244 IKZF2Q9UKS7 526 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 PPP1R3CQ9UQK1 317 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 GMPPBQ9Y5P6 360 aa14.15□□□□□ -0.14
SNCA-209ENST00000506244 TANC2Q9HCD6 1990 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 A0A1B0GWJ7 208 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 ACOD1A6NK06 481 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 MPZL2O60487 215 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 LILRA1O75019 489 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 SBK2P0C263 348 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 IGHV4-31P0DP07 118 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 DCTDP32321 178 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 ATP6V1E1P36543 226 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 RIDAP52758 137 aaKnown RBP14.14□□□□□ -0.15
SNCA-209ENST00000506244 MZT1Q08AG7 82 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 RCN1Q15293 331 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 C6orf52Q5T4I8 152 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 KLBQ86Z14 1044 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 CELF2-AS1Q8N7Q2 184 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 OR51G2Q8NGK0 314 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 ITLN1Q8WWA0 313 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 OR8B4Q96RC9 309 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 ADAT1Q9BUB4 502 aaKnown RBP14.14□□□□□ -0.15
SNCA-209ENST00000506244 MOB1AQ9H8S9 216 aa14.14□□□□□ -0.15
SNCA-209ENST00000506244 ABCA1O95477 2261 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.13□□□□□ -0.15
SNCA-209ENST00000506244 ANKRD30BLA7E2S9 258 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 GMDSO60547 372 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 ZNF16P17020 682 aaPredicted RBP14.13□□□□□ -0.15
SNCA-209ENST00000506244 PRSS12P56730 875 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 CXCR4P61073 352 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms