RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 CRYBA1P05813 215 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 PGCP20142 388 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 ABCD3P28288 659 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 RFC3P40938 356 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 SUPT4H1P63272 117 aaKnown RBP10.57□□□□□ -0.72
UBE3D-206ENST00000505226 SLC9A3R2Q15599 337 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 CCDC157Q569K6 752 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 RAB11FIP2Q7L804 512 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 PRSS58Q8IYP2 241 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 OR13C9Q8NGT0 318 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 CPNE2Q96FN4 548 aaPredicted RBP10.57□□□□□ -0.72
UBE3D-206ENST00000505226 TGM7Q96PF1 710 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 UQCC1Q9NVA1 299 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 DHCR7Q9UBM7 475 aaKnown RBP10.57□□□□□ -0.72
UBE3D-206ENST00000505226 SOCS1O15524 211 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 ZNF823P16415 610 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 BCKDHBP21953 392 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 CRABP1P29762 137 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 CAPZBP47756 277 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 AIMP2Q13155 320 aaKnown RBP10.56□□□□□ -0.72
UBE3D-206ENST00000505226 ZNF704Q6ZNC4 412 aaPredicted RBP10.56□□□□□ -0.72
UBE3D-206ENST00000505226 ANGPTL5Q86XS5 388 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 OR1M1Q8NGA1 313 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 OR4K15Q8NH41 348 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 OR51F2Q8NH61 342 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 RXFP4Q8TDU9 374 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 RNF141Q8WVD5 230 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 OIT3Q8WWZ8 545 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 ASB10Q8WXI3 467 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 NMES1Q9C002 83 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 TREM1Q9NP99 234 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 SOHLH2Q9NX45 425 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 PRAMEF26H0Y7S4 382 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 MUC1P15941 1255 aaPredicted RBP10.56□□□□□ -0.72
UBE3D-206ENST00000505226 HSD11B1P28845 292 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 CLDN6P56747 220 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 GFOD2Q3B7J2 385 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 ANKRD55Q3KP44 614 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 TMEM244Q5VVB8 128 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 CLEC18BQ6UXF7 455 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 RNF133Q8WVZ7 376 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 ARL11Q969Q4 196 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 OR10C1Q96KK4 312 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 C1orf147Q96MC9 270 aaPredicted RBP10.56□□□□□ -0.72
UBE3D-206ENST00000505226 CNTNAP3BQ96NU0 1288 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 MESP1Q9BRJ9 268 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 LPAR5Q9H1C0 372 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 CTSFQ9UBX1 484 aa10.56□□□□□ -0.72
UBE3D-206ENST00000505226 TMEM14DPA8MWL7 114 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 C9JQL5 133 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 IFNA6P05013 189 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 H2BFMP0C1H6 154 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 MMP16P51512 607 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 PLCXD2Q0VAA5 305 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 PNLIPRP3Q17RR3 467 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.55□□□□□ -0.72
UBE3D-206ENST00000505226 TERB2Q8NHR7 220 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 GLYATL2Q8WU03 294 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 KCNK17Q96T54 332 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 EMC6Q9BV81 110 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 HRH4Q9H3N8 390 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 GPR132Q9UNW8 380 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 WDR87Q6ZQQ6 2873 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 ZNF705EA8MWA4 302 aaPredicted RBP10.55□□□□□ -0.72
UBE3D-206ENST00000505226 H3BMH7 237 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 BPNT1O95861 308 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 ABOP16442 354 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 TMEM50BP56557 158 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 NAAAQ02083 359 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 ZNF529Q6P280 563 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 ETV3LQ6ZN32 361 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 SLC29A4Q7RTT9 530 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 SLC22A24Q8N4F4 322 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 RTBDNQ9BSG5 229 aaPredicted RBP10.55□□□□□ -0.72
UBE3D-206ENST00000505226 WWTR1Q9GZV5 400 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 PBOV1Q9GZY1 135 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 MMP26Q9NRE1 261 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 A0A1W2PQD3 144 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 ZNF354AO60765 605 aaPredicted RBP10.55□□□□□ -0.72
UBE3D-206ENST00000505226 CBX5P45973 191 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 FOXK1P85037 733 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 TDGQ13569 410 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 TMEM128Q5BJH2 165 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 AWAT2Q6E213 333 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 PGAP1Q75T13 922 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.55□□□□□ -0.72
UBE3D-206ENST00000505226 DTWD2Q8NBA8 298 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 DMBX1Q8NFW5 382 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 BANF2Q9H503 90 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 PDE7BQ9NP56 450 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 OR2S2Q9NQN1 319 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 LPAR3Q9UBY5 353 aa10.55□□□□□ -0.72
UBE3D-206ENST00000505226 TMEM150CB9EJG8 249 aa10.54□□□□□ -0.72
UBE3D-206ENST00000505226 SYT7O43581 403 aa10.54□□□□□ -0.72
UBE3D-206ENST00000505226 ID4P47928 161 aa10.54□□□□□ -0.72
UBE3D-206ENST00000505226 CX3CR1P49238 355 aa10.54□□□□□ -0.72
UBE3D-206ENST00000505226 EMP2P54851 167 aa10.54□□□□□ -0.72
UBE3D-206ENST00000505226 PJVKQ0ZLH3 352 aa10.54□□□□□ -0.72
UBE3D-206ENST00000505226 SMAD2Q15796 467 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms