RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 GK2Q14410 553 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 OR8G1Q15617 311 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 SAMD4BQ5PRF9 694 aaKnown RBP13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 PRAMEF6Q5VXH4 476 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 LRRN1Q6UXK5 716 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 ZNF620Q6ZNG0 422 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 NAA40Q86UY6 237 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 ZDHHC21Q8IVQ6 265 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 BOLLQ8N9W6 283 aaKnown RBP13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 C19orf18Q8NEA5 215 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 PROKR2Q8NFJ6 384 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 SPTSSAQ969W0 71 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 ZDHHC16Q969W1 377 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 MMADHCQ9H3L0 296 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 EGLN3Q9H6Z9 239 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 CLN8Q9UBY8 286 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 SOX21Q9Y651 276 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 IGHV2-70DA0A0C4DH43 119 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 OR6C68A6NDL8 312 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 M0R135 149 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 IDH3BO43837 385 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 SEMG1P04279 462 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 IGHV4-38-2P0DP08 117 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 HSD17B1P14061 328 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 PYCR1P32322 319 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 GGT2P36268 569 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 RPS27P42677 84 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 TSPAN31Q12999 210 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 ZNF404Q494X3 552 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 FIP1L1Q6UN15 594 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 ZBTB46Q86UZ6 589 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 PGAM4Q8N0Y7 254 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 CYB561A3Q8NBI2 242 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 ZNF799Q96GE5 643 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 TECTBQ96PL2 329 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 CDRT15Q96T59 188 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 ADAT1Q9BUB4 502 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 C1RLQ9NZP8 487 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 CYB5R1Q9UHQ9 305 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 N6AMT1Q9Y5N5 214 aa13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 KMT2CQ8NEZ4 4911 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-213ENST00000505074 MDFIC2A0A1B0GVS7 189 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 GGT3PA6NGU5 568 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 TVP23AA6NH52 213 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 SRRM5B3KS81 715 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 SNX3O60493 162 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 FAM20BO75063 409 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 TSPAN15O95858 294 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 PPIAL4GP0DN37 164 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 CA6P23280 308 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 CPT2P23786 658 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 GSSP48637 474 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 KRTAP10-3P60369 221 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 RELBQ01201 579 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 PAX8Q06710 450 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 PDCD1Q15116 288 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 TAF13Q15543 124 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 ZNF181Q2M3W8 571 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 RSPO1Q2MKA7 263 aaPredicted RBP13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 PGBD2Q6P3X8 592 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 COLCA1Q6ZS62 124 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 LNX2Q8N448 690 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 OR9Q2Q8NGE9 314 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 FAM110DQ8TAY7 271 aaPredicted RBP13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 RAB40AQ8WXH6 277 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 NUDT16L1Q9BRJ7 211 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 COPS4Q9BT78 406 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 TNFRSF19Q9NS68 423 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 TBC1D23Q9NUY8 699 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 MRPL22Q9NWU5 206 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 NOP16Q9Y3C1 178 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 DOCK11Q5JSL3 2073 aa13.34□□□□□ -0.27
PDLIM7-213ENST00000505074 C3orf80F5H4A9 247 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 PLATP00750 562 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 PMELP40967 661 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 MAB21L1Q13394 359 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 RPL13AP3Q6NVV1 102 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 C16orf89Q6UX73 402 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 LYPD2Q6UXB3 125 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 Q6ZPA2 131 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 DCDC5Q6ZRR9 648 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 OR51L1Q8NGJ5 315 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 OR2T4Q8NH00 348 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 OR2AE1Q8NHA4 323 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 MAP6Q96JE9 813 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 FN3KRPQ9HA64 309 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 IL1RAPQ9NPH3 570 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 PNRC2Q9NPJ4 139 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 TAGLN3Q9UI15 199 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 KCNG2Q9UJ96 466 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 RNF114Q9Y508 228 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 CDH10Q9Y6N8 788 aa13.33□□□□□ -0.28
PDLIM7-213ENST00000505074 TNFRSF11BO00300 401 aa13.32□□□□□ -0.28
PDLIM7-213ENST00000505074 SPARCP09486 303 aa13.32□□□□□ -0.28
PDLIM7-213ENST00000505074 CD200P41217 278 aa13.32□□□□□ -0.28
PDLIM7-213ENST00000505074 GATA4P43694 442 aa13.32□□□□□ -0.28
PDLIM7-213ENST00000505074 OR8B8Q15620 311 aa13.32□□□□□ -0.28
PDLIM7-213ENST00000505074 MPPED2Q15777 294 aa13.32□□□□□ -0.28
PDLIM7-213ENST00000505074 DEFB112Q30KQ8 113 aa13.32□□□□□ -0.28
PDLIM7-213ENST00000505074 SNAI3Q3KNW1 292 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms