RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ST3GAL3Q11203 375 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 KRR1Q13601 381 aaKnown RBP5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 GK2Q14410 553 aaPredicted RBP5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 CDONQ4KMG0 1287 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 RABL3Q5HYI8 236 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 FAM90A1Q86YD7 464 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 LINC00346Q8IVM7 164 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 GLB1L2Q8IW92 636 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 CELF2-AS1Q8N7Q2 184 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 OR4C13Q8NGP0 309 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 LZICQ8WZA0 190 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 ERGIC1Q969X5 290 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 SLCO4A1Q96BD0 722 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 PHF21AQ96BD5 680 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 TPD52L3Q96J77 140 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 CLPTM1LQ96KA5 538 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 PRRC1Q96M27 445 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 ZNF583Q96ND8 569 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 NKX3-1Q99801 234 aaPredicted RBP5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 HDHD2Q9H0R4 259 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 KAT8Q9H7Z6 458 aaKnown RBP5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 CNTD2Q9H8S5 307 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 RAB21Q9UL25 225 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 KPTNQ9Y664 436 aa5.66□□□□□ -1.5
NPIPB3-203ENST00000504841 MEIOCA2RUB1 952 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 GGT3PA6NGU5 568 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 F5H5K5 113 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 RNASEK-C17orf49H0YIS7 233 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 J3KTA2 159 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 CDC42EP2O14613 210 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 NDUFA2O43678 99 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 XPNPEP2O43895 674 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 FBXO24O75426 580 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 CD14P08571 375 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 GGT2P36268 569 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 EFNB2P52799 333 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 LSM6P62312 80 aaKnown RBP5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 ECH1Q13011 328 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 MALLQ13021 153 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 IKZF1Q13422 519 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 CYBRD1Q53TN4 286 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 FOXB2Q5VYV0 432 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 CCBE1Q6UXH8 406 aaPredicted RBP5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 ZNF730Q6ZMV8 503 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 CFAP77Q6ZQR2 320 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 PGAP1Q75T13 922 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 CCDC80Q76M96 950 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 FAM122BQ7Z309 247 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 CROCCP2Q86T23 111 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 NAA40Q86UY6 237 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 CMTM4Q8IZR5 234 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 FAM216BQ8N7L0 139 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 SPERTQ8NA61 448 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 OR4S1Q8NGB4 309 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 OR5R1Q8NH85 324 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 OR2T6Q8NHC8 308 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 PPP1R35Q8TAP8 253 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 LRRC8CQ8TDW0 803 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 H1FXQ92522 213 aaKnown RBP5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 R3HDM4Q96D70 268 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 TSSK2Q96PF2 358 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 CCL13Q99616 98 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 PITX2Q99697 317 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 COQ7Q99807 217 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 CCDC28BQ9BUN5 200 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 FNDC11Q9BVV2 318 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 PARD6BQ9BYG5 372 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 POLR2J2Q9GZM3 115 aaKnown RBP5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 NDEL1Q9GZM8 345 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 NUAK2Q9H093 628 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 POLR2J3Q9H1A7 115 aaKnown RBP5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 MMP28Q9H239 520 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 TRIM36Q9NQ86 728 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 FBLN5Q9UBX5 448 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 ATPIF1Q9UII2 106 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 A4GNTQ9UNA3 340 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 LHFPL6Q9Y693 200 aa5.65□□□□□ -1.5
NPIPB3-203ENST00000504841 A0A1B0GWJ7 208 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 CD300LBA8K4G0 201 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 ECDO95905 644 aaPredicted RBP5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 IFNA14P01570 189 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 ACSM4P0C7M7 580 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 ZNF26P17031 533 aaPredicted RBP5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 PAX6P26367 422 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 GZMMP51124 257 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 GMFBP60983 142 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 PRKCDQ05655 676 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 FHL1Q13642 323 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 TRAM2Q15035 370 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 ZBED5Q49AG3 693 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 DEFB121Q5J5C9 76 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 WDR38Q5JTN6 314 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 COLCA1Q6ZS62 124 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 CALHM3Q86XJ0 350 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 DPP10Q8N608 796 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 GCSAMQ8N6F7 178 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 GJC3Q8NFK1 279 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 OR51G2Q8NGK0 314 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 OR2AE1Q8NHA4 323 aa5.64□□□□□ -1.51
NPIPB3-203ENST00000504841 LRRC29Q8WV35 223 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms