RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 MALLQ13021 153 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 PSG7Q13046 419 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 SNAI3Q3KNW1 292 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 TMEM255AQ5JRV8 349 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 ZNF684Q5T5D7 378 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 LAIR2Q6ISS4 152 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 PLEKHG7Q6ZR37 379 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 SSX6Q7RTT6 188 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 KCTD20Q7Z5Y7 419 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 EGFL6Q8IUX8 553 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 LRRC75A-AS1Q8N1F1 130 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 OR52H1Q8NGJ2 320 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 OR52I1Q8NGK6 324 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 CMBLQ96DG6 245 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 MYCBPQ99417 103 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 JAM3Q9BX67 310 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 CACNG6Q9BXT2 260 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 GSX2Q9BZM3 304 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 MS4A5Q9H3V2 200 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 INPP5EQ9NRR6 644 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 PTTG3PQ9NZH4 202 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 TAAR3PQ9P1P4 343 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 MYEF2Q9P2K5 600 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 CGGBP1Q9UFW8 167 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 MRM2Q9UI43 246 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 IKZF2Q9UKS7 526 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 RAB26Q9ULW5 256 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 A0A1W2PPW3 197 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 C5orf63A6NC05 138 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 METTL15A6NJ78 407 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 M0R233 179 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 XRCC2O43543 280 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 SRSF10O75494 262 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 KRT8P05787 483 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 ANXA2P07355 339 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 SLC2A1P11166 492 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 LIPAP38571 399 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 CSNK2BP67870 215 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 GALEQ14376 348 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 GK2Q14410 553 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 HLXQ14774 488 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 SNCBQ16143 134 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 CDONQ4KMG0 1287 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 GLYATL3Q5SZD4 288 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 SNX33Q8WV41 574 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 SPSB4Q96A44 273 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 TRMT61AQ96FX7 289 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 MRPL48Q96GC5 212 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 ZNF184Q99676 751 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 FOXC2Q99958 501 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 TTTY10Q9BZA0 68 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 OR10A2Q9H208 303 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 OPA3Q9H6K4 179 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 FAM206AQ9NX38 181 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 PURGQ9UJV8 347 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 MYRFQ9Y2G1 1151 aa10.18□□□□□ -0.78
PDLIM5-208ENST00000504489 CR1P17927 2039 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 TEX15Q9BXT5 2789 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 TMEM269A0A1B0GVZ9 245 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 MAGEB4O15481 346 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 FAM20BO75063 409 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 MT-ND5P03915 603 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 ADRA2AP08913 450 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 TACSTD2P09758 323 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 PIPP12273 146 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 ANOS1P23352 680 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 CFL1P23528 166 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 DCKP27707 260 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 CDKN1AP38936 164 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 ALDH3B1P43353 468 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 PTH2RP49190 550 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 MMP15P51511 669 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 ZNF92Q03936 586 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 NKPD1Q17RQ9 610 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 ZNF829Q3KNS6 432 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 C6orf141Q5SZD1 244 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 LIPNQ5VXI9 398 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 FAM57BQ71RH2 274 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 PGAP1Q75T13 922 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 MRPL21Q7Z2W9 205 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 YIPF7Q8N8F6 280 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 GGHQ92820 318 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 SGK3Q96BR1 496 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 PGAM5Q96HS1 289 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 ZNF649Q9BS31 505 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 RAB1BQ9H0U4 201 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 CXXC4Q9H2H0 198 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 RGCCQ9H4X1 137 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 DYNLRB1Q9NP97 96 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 BRD7Q9NPI1 651 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 CYSLTR2Q9NS75 346 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 ERVK13-1Q9NX77 482 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 CNOT2Q9NZN8 540 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 ZNF319Q9P2F9 582 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 PSORS1C1Q9UIG5 152 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 ZNF391Q9UJN7 358 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 N6AMT1Q9Y5N5 214 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 R4GMQ9 66 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 MED13LQ71F56 2210 aa10.17□□□□□ -0.78
PDLIM5-208ENST00000504489 MAP1AP78559 2803 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms